Gene MmarC6_0838 details

Gene Information

• Locus tag: MmarC6_0838
• ID: 5738033
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 780812
• End bp: 781468
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 641283305
• Product: xylose isomerase domain-containing protein
• Protein accession: YP_001548887
• Protein GI: 159905225
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1082] Sugar phosphate isomerases/epimerases

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 0.873585
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGGAA CATGCATGCG ATTTTCAAAA CCTGAAAAAG GAGTGGAATT TACCGATTGG 
GGCCTTCACT TTTGCTCCAA TGTTGATGAA CATTTTAAAA GTGGACTTAA TGGATTTCAC 
GCACCTATCG TAGATATCGG AACCCCAAAT AAAACCGAAG GACTTCAAAC ATTAAAAAAT 
GTAATTAATA ATATCCATGG AGCAGATTAT TTAACAATAC ACCTCCACAA TGGAAAAGAA 
CCAGAATATA ATACTCTTTT AGATAATGTT TCAGAATTAA ACGAATATTC TAAAGAAAGA 
AATATTGAAC TTTGCATCGA AAATTTAAGA AATGGATTTT CTTCAAAACC TGAAAACGTA 
ATAAATGTTG CAGAAGAAAC CGGATGCAAA ATAACGTTTG ATATCGGACA TACACCCTAT 
GAAAACAGAA AATCCTGTAT CGACATATTT TCTGATAAAA TTTACAACGT GCATACTTAC 
GAGCGAGAAT GCGATAAAAT AGGACATATT GCTCCAAAAG ATTTGACAAA TTTAAAACCT 
GTTTTAGACG GCCTTTTAGA TGTTGGCTGT GATTTCTGGC TTATTGAATT GATGAATGTC 
GAAGAAATAG AAAGTACGAA AAACATGTTA AATAAATACC TTGAATGCCA TAGATAA 

 

Protein sequence

MIGTCMRFSK PEKGVEFTDW GLHFCSNVDE HFKSGLNGFH APIVDIGTPN KTEGLQTLKN 
VINNIHGADY LTIHLHNGKE PEYNTLLDNV SELNEYSKER NIELCIENLR NGFSSKPENV 
INVAEETGCK ITFDIGHTPY ENRKSCIDIF SDKIYNVHTY ERECDKIGHI APKDLTNLKP 
VLDGLLDVGC DFWLIELMNV EEIESTKNML NKYLECHR