Gene MmarC6_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_0816 
Symbol 
ID5738132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp760844 
End bp761347 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content38% 
IMG OID641283283 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_001548865 
Protein GI159905203 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CTGTTGAAGG CAAAGCATGG GTTTTTGGAG ATAATATCGA TACTGATGCA 
ATATTACCTG CAAGATACCT TGTATACACT ACCGAAGAAC AGCTTGCAAA ATACGCAATG
ACTGGAACCG ACCCAGAATT CCCAGAAAAA GCTGCTGTTG GCGATATAAT CGTTGGTGGC
AAGAATTTCG GCTGCGGAAG TTCAAGAGAG CACGCTCCAA TTGGTTTGAA AGGTTTAGGA
ATTTCAATGG TTATTGCAGA AAGTTTTGCA AGAATTTTTT ACAGAAATTC CATCAATATC
GGATTTCCGT TATTGGAATG TAAAGATATT TCAAAACACG TAAAAGAAGG CGACATTTTA
AGAGTAGACC TTGATAAAGG CACTATTAAA AACGTTACAA CCGGCGCTGA ATTAACCGGC
CAAAACCTTC CAGATTTCAT GATGGAAATC TTAAACAATG GCGGATTAAT GCCGCACTTG
AAGAAAAAGA TTTCAAAAGC TTAA
 
Protein sequence
MKKTVEGKAW VFGDNIDTDA ILPARYLVYT TEEQLAKYAM TGTDPEFPEK AAVGDIIVGG 
KNFGCGSSRE HAPIGLKGLG ISMVIAESFA RIFYRNSINI GFPLLECKDI SKHVKEGDIL
RVDLDKGTIK NVTTGAELTG QNLPDFMMEI LNNGGLMPHL KKKISKA