Gene MmarC6_0797 details

Gene Information

• Locus tag: MmarC6_0797
• Symbol: aksA
• ID: 5738115
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 738700
• End bp: 739860
• Gene Length: 1161 bp
• Protein Length: 386 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641283264
• Product: trans-homoaconitate synthase
• Protein accession: YP_001548846
• Protein GI: 159905184
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0119] Isopropylmalate/homocitrate/citramalate synthases
• TIGRFAM ID: [TIGR02090] isopropylmalate/citramalate/homocitrate synthases

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.0215775
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTGGA AAGCTGTATC TCCGTACAAC CCTAAATTAA ATTTGAAAGA CTGTTATCTG 
TATGATACTA CATTGCGGGA TGGTGAACAG ACCCCCGGAG TTTGTTTTAC GCATGACCAA 
AAACTTGATA TCGCCAAAAA ACTGGATGAA CTTAAAATTA AGCAGATTGA AGCGGGTTTT 
CCAATTGTTT CTGAAAACGA AAGAAAAGCC ATCAAATCAA TTACTGGCGA AGGATTGAAC 
GCGCAGATTT TGGCATTATC ACGAGTTTTA AAAGAAGATA TTGATAAAGC AATTGAATGC 
GACGTTGACG GGATAATTAC ATTCATTGCA GCTTCTCCGA TGCATTTGAA ATATAAATTG 
CACAAAACCC TCGATGAAGT TGAAGAAATG GGTATGAAAG CCGTTGAATA CGCAAAAGAC 
CACGGACTTT TCGTAGCATT CTCTGCAGAG GATGCAACAA GAACTCCAAT TGAAGATCTC 
ATCAGAATCC ACAAAAATGC AGAAGAACAC GGTGCTGATA GGGTGCATAT TGCAGATACC 
CTCGGATGTG CAACACCCCA AGCAATGTAC CATATCTGCT CTGAATTGAG CAAAAACTTG 
AAAAAAGCAC ATATTGGAGT ACACTGCCAC AATGACTTTG GATTTGCAGT TATAAATTCA 
ATATATGGAT TAATTGGTGG CGCAAAAGCA GTATCCACAA CCGTTAATGG AATAGGGGAA 
AGAGCAGGAA ATGCTGCAAT TGAAGAAATT GTAATGGCAT TGAAAGTGCT TTATGACCAC 
GACATGGATT TAAACACTGA AATACTAACT GAAATGTCAA AACTTGTTGA AAACTATTCA 
AAAATTAGGA TTCCAGAAAA TAAACCGCTT GTAGGAGAAA TGGCATTCTA CCATGAAAGT 
GGAATACACG TTGATGCAGT TTTAGAGAAT CCATTAACGT ATGAACCATT TTTACCCGAA 
AAAATAGGTC AGAAAAGAAA AATTATACTT GGAAAACATT CCGGATGTAG AGCTGTTGCA 
CATAGATTAC AAGAACTTGG ACTTGAAGCA TCAAGAGAAG AACTCTGGGA AATTGTAAAG 
AAAACAAAAG AAACCAGAGA AGAAGGTACT GAGATAAATG ACGAAGTGTT TAAAAACATT 
GTCGATAAGA TTATAAAATA A 

 

Protein sequence

MDWKAVSPYN PKLNLKDCYL YDTTLRDGEQ TPGVCFTHDQ KLDIAKKLDE LKIKQIEAGF 
PIVSENERKA IKSITGEGLN AQILALSRVL KEDIDKAIEC DVDGIITFIA ASPMHLKYKL 
HKTLDEVEEM GMKAVEYAKD HGLFVAFSAE DATRTPIEDL IRIHKNAEEH GADRVHIADT 
LGCATPQAMY HICSELSKNL KKAHIGVHCH NDFGFAVINS IYGLIGGAKA VSTTVNGIGE 
RAGNAAIEEI VMALKVLYDH DMDLNTEILT EMSKLVENYS KIRIPENKPL VGEMAFYHES 
GIHVDAVLEN PLTYEPFLPE KIGQKRKIIL GKHSGCRAVA HRLQELGLEA SREELWEIVK 
KTKETREEGT EINDEVFKNI VDKIIK