| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0775 |
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| Symbol | |
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| ID | 5738648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 717932 |
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| End bp | 720277 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641283242 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001548824 |
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| Protein GI | 159905162 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGACT TAGTAGTTGC AGAAGCCTAT CAGGGCGATG TAGGTAAAGG AATTGTAAGA
ATTGATCCAT TAACAATGGA AAAATTATCA ATAAAAGCCG GAGATGCAAT AGAAATTGCA
GGGAAGGAAA AAACTTACGC GACCGTCTGG AGAGGATACC TTGAAGACCA AGGTAAAGGT
ATCATAAGAA TGGACGGTAT TTTAAGACAA AATACTAAAG CAGGTATTGG GGACAAGGTA
AAAATTACCG TAGTGGAAGT AAAAGAAGCT AAAAAAATAA CACTAGCTCC AATGCAGGCC
GTAAGATTCA GTACCGGATT TGAAAGCTAT GTTGGAAGCA GACTTGTAGA CCAGGTTGTC
GATAAAGGAT CCAAAGTAGT AATTGGTGTT TTGGGAACGG CATTTCCATT TATCGTAACA
GGAACTACTC CAAAAGGGCC CGCGAAAATT AACGAATACA CCCAAATCGA GTTAAAAACT
GAACCAGTTA CAGAATTAAA AGAAACCAAA GTCCCAAATG TCACCTATGA AGACATTGGT
GGTTTAAAAG AAGAAGTCAA AAAAATCAGG GAAATGGTAG AACTTCCAAT GAGATACCCC
GAATTATTTG ACAAACTCGG TATTGAACCT CCAAAAGGAG TTTTACTTGC AGGACCTCCA
GGAACGGGTA AAACGCTCCT TGCAAAAGCT GTTGCAAACG AAGCAGGTGC TAATTTCTAT
ACAATTAACG GCCCTGAAAT AATGAGTAAA TACGTCGGTG AAACCGAAGA AAATTTAAGA
AAAATATTTG AAGAAGCTGA AGAAAACTCG CCTTCGATCA TATTCATCGA CGAAATCGAT
GCAGTTGCTC CAAAAAGGGA TGAAGCTAGC GGTGAAGTTG AAAGAAGAAT GGTTGCACAG
CTCTTGACAT TACTTGACGG CCTAGAAGGT AGGGGTCAGG TCGTAATTCT TGCAGCTACG
AACAGGCCAG ATTCAATCGA TATGGCTTTG AGAAGACCTG GAAGGCTTGA CAGGGAACTC
ACAATTGGAA TTCCAGATAG GCATGCGAGA AACGAAATTT TACAGATTCA TACAAGAAAT
ATGCCTCTTC AACCGGATTA CGAGAAAAAT GAAGTAATTC CCGTATTAAA CGAACTTATC
GGGGAATTCG ACAGAAGTAA AATTGAAAGT ATAGTTAAAT TGGTTGAAAA AGCGTCTTCG
GAAGCCGAAA TTGAAAAAAT ACTCAAAGAT GAAGACATAG AAGATAAAGT AAAAGTAAAA
TTAAACCAAA TAATGGTAAA AGAACTTGCA GACAAAACCC ACGGATTTGC AGGTGCTGAT
TTAGCTGCTC TTTCAAAAGA AGCTGCTATG AAAACTTTGA GAAGATTACT TCCGGATATC
GACCTTGAAA AAGAAGAAAT TCCAAGAGAA GTGCTCGATA AAATTAAAGT AACTAAAAGC
GACTTTGTAG GCGGTTTAAA AGAGGTAGAA CCTTCAGCAC TTAGAGAAGT ATTGGTAGAA
GTTCCAAATA TCAAATGGAG TGATGTTGGA GGACTTGAAG ACATTAAACA GGATCTAAAA
GAAGCTGTTG AATGGCCAAT CAAAAACAGG GAAATGTTTG AAAGAATGGG AATAAGACCT
CCAAAAGGAG TGTTGCTCTT TGGCCCCCCA GGAACTGGTA AAACACTCCT TGCAAAAGCT
GTTGCAAACG AAAGTGAAGC AAATTTTATC AGCGTAAAAG GTCCCGAAAT ATTTAGCAAA
TGGGTTGGAG AAAGCGAAAA AGCAATCCGT GAAATATTTA GAAAAGCAAG GCAGGCTGCA
CCGACAGTAA TTTTCTTTGA TGAAATTGAC TCAGTAGCTC CAAAAAGAGG AATGAGCTTT
GGTGGTAGTG GAGTTAGCGA AAAAGTTGTA AACCAGCTTT TAACTGAACT CGATGGCCTT
GAAGAACCAA AAGACGTTGT AATTATTGCT GCAACAAATA GGCCCAACCT ATTAGACCCG
GCACTTTTAA GACCTGGAAG ACTTGATAGG ATCGTCTTGG TAACTGTTCC TGACGAAAAT
GCACGATTTG AAATATTTAA AGTTCATACA AAAGGAATGC CTATTGGAAA AGATGTTGAT
CTCCAAAAAC TTTCAAAAGA AACTAATGGA TACACCGGTG CAGACATTGA AGCATTGTGT
AGAGAAGCTG CAATGATCGC ACTAAGAGAA GACATTAATT CAAAACATGT TGAATTGAGG
CATTTTGAAA GCGCGTTCAA AAGAATCGCC CCTTCAGTAA AAGAAGAAGA CATGGATGAA
TACCGGGATC TTGCAAAAGA ATACGGAAGA ACTACAGGAG TATCTGAAAT TGAAACTTCC
GAATAA
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| Protein sequence | MVDLVVAEAY QGDVGKGIVR IDPLTMEKLS IKAGDAIEIA GKEKTYATVW RGYLEDQGKG
IIRMDGILRQ NTKAGIGDKV KITVVEVKEA KKITLAPMQA VRFSTGFESY VGSRLVDQVV
DKGSKVVIGV LGTAFPFIVT GTTPKGPAKI NEYTQIELKT EPVTELKETK VPNVTYEDIG
GLKEEVKKIR EMVELPMRYP ELFDKLGIEP PKGVLLAGPP GTGKTLLAKA VANEAGANFY
TINGPEIMSK YVGETEENLR KIFEEAEENS PSIIFIDEID AVAPKRDEAS GEVERRMVAQ
LLTLLDGLEG RGQVVILAAT NRPDSIDMAL RRPGRLDREL TIGIPDRHAR NEILQIHTRN
MPLQPDYEKN EVIPVLNELI GEFDRSKIES IVKLVEKASS EAEIEKILKD EDIEDKVKVK
LNQIMVKELA DKTHGFAGAD LAALSKEAAM KTLRRLLPDI DLEKEEIPRE VLDKIKVTKS
DFVGGLKEVE PSALREVLVE VPNIKWSDVG GLEDIKQDLK EAVEWPIKNR EMFERMGIRP
PKGVLLFGPP GTGKTLLAKA VANESEANFI SVKGPEIFSK WVGESEKAIR EIFRKARQAA
PTVIFFDEID SVAPKRGMSF GGSGVSEKVV NQLLTELDGL EEPKDVVIIA ATNRPNLLDP
ALLRPGRLDR IVLVTVPDEN ARFEIFKVHT KGMPIGKDVD LQKLSKETNG YTGADIEALC
REAAMIALRE DINSKHVELR HFESAFKRIA PSVKEEDMDE YRDLAKEYGR TTGVSEIETS
E
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