Gene MmarC6_0706 details

Gene Information

• Locus tag: MmarC6_0706
• ID: 5739073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 649705
• End bp: 650199
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 641283172
• Product: ribosomal biogenesis protein
• Protein accession: YP_001548755
• Protein GI: 159905093
• COG category: [A] RNA processing and modification; [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG2136] Predicted exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 domain

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAATTA CCACTTCCAG AAAACCTTCT CAAAGAACCA GAAGCCTTGT AAACGATTTA 
GCGAGGGTTT TTAATTTTGA AATATTAAAC AGGGGCAAAA TTCCTCTCTC CGAGCTAATC 
GAAAATAAGG CCGATATGAT AATTGTAGAA GAATTGAAGG GAAATCCTGG AAGGCTCAAA 
ATATTTAATT TTGAAAATAA TAAAATTCTT TCAATGAATC TATCATTAAA ACTTCAAAGG 
GAAGTTTCGG GAAAAGTTTT TAAAAACTCG GGAAAATTGA GTTCAAAGTT TGATAGAAAT 
ACTGAAAATT TAAAAGAATT GTTTTTCGAA TATTTATTCA AAAAATTGGG TAATTATGAA 
GAAGAGAGTT CTGATGTAGT GCTTACATTT AAAACGGTTG ACGAGTCTAC ATTCTACATT 
GAAGTTCACA AAGACTCGGA AAATTTAGGT CCAAGTCTAA AGATAAAGAC CGTAAAGATA 
CTCGATATTG AGTAG 

 

Protein sequence

MIITTSRKPS QRTRSLVNDL ARVFNFEILN RGKIPLSELI ENKADMIIVE ELKGNPGRLK 
IFNFENNKIL SMNLSLKLQR EVSGKVFKNS GKLSSKFDRN TENLKELFFE YLFKKLGNYE 
EESSDVVLTF KTVDESTFYI EVHKDSENLG PSLKIKTVKI LDIE