| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0703 |
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| Symbol | |
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| ID | 5739065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 648486 |
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| End bp | 649190 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641283169 |
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| Product | putative RNA-associated protein |
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| Protein accession | YP_001548752 |
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| Protein GI | 159905090 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1500] Predicted exosome subunit |
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| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.343486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTCAT TGGACGATGC TGTTATAGCA AGGCTTCAAT CACATGGGGA AAAATTCGAA
ATACTCGTGG ATCCGTACTT GGCAGCTAAA TTTAAAGAAG GACAGCCAAT AGGCATCTCA
GAAGTCTTGG CCGCTGAAGC GGTTTATAAA GATTCTGGAA AAGGAGAAAA AGTTCCAGAA
GATTTACTTT TGAAGATTTT TGAAACCTTG AATCCTTTGG AAATCGCAGA ACAGATTCTA
AAAAAAGGAA CTGTTCAGTT AACGGCTAAC CAGCGAAAAG AAATACAAGA ACAAAAGCGA
AAACAAATCG TGTCTTTAAT TTCGAAAAAC ACGATAAATC CTCAAACTGA CACTCCCCAC
CCGCCAAAAA GGATTGAAAA CGCCATGGAA GAAGCTAGAC TCAGTGTTGA TATTTATAAA
AGCGCTGAAG AACAAATTCC TAAAATTATT AAGGAATTAA GGAAACTTTT ACCCATTAAG
TTTGAAAAAA GAGATGTTGC AGTTAAAATT CCCGGAGAAT TTGCTGCAAA TGCATACCAT
ACACTTCATG AATACGGCGC AACCAAACAG GAAGCGTGGA TGGGCGATGG CTCGCTTGTT
CTTGTAATTG AAATTCCAAG CGGTATTGAA AGCGAATTTT ACATGCATTT GAACAAACTT
ACAAAAGGAA CTGTTCAAAC TAAAGTACTT AAAAGATATG ACTAA
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| Protein sequence | MVSLDDAVIA RLQSHGEKFE ILVDPYLAAK FKEGQPIGIS EVLAAEAVYK DSGKGEKVPE
DLLLKIFETL NPLEIAEQIL KKGTVQLTAN QRKEIQEQKR KQIVSLISKN TINPQTDTPH
PPKRIENAME EARLSVDIYK SAEEQIPKII KELRKLLPIK FEKRDVAVKI PGEFAANAYH
TLHEYGATKQ EAWMGDGSLV LVIEIPSGIE SEFYMHLNKL TKGTVQTKVL KRYD
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