| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0684 |
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| Symbol | truA |
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| ID | 5739013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 631170 |
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| End bp | 631958 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641283150 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001548733 |
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| Protein GI | 159905071 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACATAT TTAAGATTGC ATACGATGGA AGATTAAGTT TTCAAACGCA GCCTCACGGA
GAAACAGTCT GTGACAAAAT TTCAAATGCA CTTTTAGACT GTGGATATTT AGATAACAAG
GATAGAGTTC CCCTTTACCA TGGAGGAAGA ACTGATCGAG GAGTATCCGC ACTTGGTAAT
TATATCGTCT ACGAAATGGA CAAAAAACCG GTACTTCCTA GAGTTCAGTC TAAACTTAAA
TGGGACGGAG TATGGGTTTT AGGATGTAAA GAGATCGATA CTTTTCCAGA AATAGAATAC
AGGCATTACC AGTATAATTT ACCAAATAAA AATCACGATG TCGAATTGAT GAAAAAGGCA
TCTGAAAAAC TGATCGGAAC GCATTATTTC CAGAATTTAT CAAAACGGGA TAAATCAAAA
GTAAAAGATC CAGTTCGAAC ACTTTACAAC ATTAAAATAT CTTCAAATGA TTATTTCATT
ACTATTGATA TTTTTGGAGA AAGTTTTCTC TGGAACATGG TTCGAAGAAT CATAAGGCTT
CTTTCAGATA TTGGAAAACA CAAAATTAAG GATCCTGAAA AATTCATCGA ATTAATCCTC
TCAGAAGATT ACAGCAAAGG TTATCCGCCA TCCCCGGCCG AAGGTTTAAT ACTTGTTGAC
GTCAAAACTA ATATTGACGT TGATATTGAT AGTTATGTCC TTAGAATGTT AAAAAATAGC
TGGGAAAAAT CCCTGAATAA CAGTTTGATG AGACTTGGAC TCTGTAAAAC CGTTTTATCG
AAAACCTGA
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| Protein sequence | MYIFKIAYDG RLSFQTQPHG ETVCDKISNA LLDCGYLDNK DRVPLYHGGR TDRGVSALGN
YIVYEMDKKP VLPRVQSKLK WDGVWVLGCK EIDTFPEIEY RHYQYNLPNK NHDVELMKKA
SEKLIGTHYF QNLSKRDKSK VKDPVRTLYN IKISSNDYFI TIDIFGESFL WNMVRRIIRL
LSDIGKHKIK DPEKFIELIL SEDYSKGYPP SPAEGLILVD VKTNIDVDID SYVLRMLKNS
WEKSLNNSLM RLGLCKTVLS KT
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