| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0676 |
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| Symbol | |
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| ID | 5738989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 621643 |
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| End bp | 622785 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641283142 |
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| Product | TraB family protein |
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| Protein accession | YP_001548725 |
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| Protein GI | 159905063 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.203898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATATAA GGGTTAACAA TGGCGTTACG GAATGTAACA TCAGATTGGT AGGAACTGCA
CACGTATCTG ATGATAGTAT TACTGATGTA GAGAACGCTA TCGTTGAAAC GGATCCAGAA
TTAGTGGCTA TTGAATTAGA TAAAGACCGA TTTGTAGCCA TGTTTCAAAA TAAAAAAAAT
GACGTGGATT TAAAATCAGT CATAAAACAA GGAAAAGTAG GAATATTCAT AGTGCACTCC
ATCTTAGCAA ACTTCCAGAA AAATATCGGG GAACAGTTTG GGATAAAACC TGGAAGCGAA
ATGAAAAAAG CCACCGATCT TGCAATACAG TACGGAAAAC CACTTTCACT AATTGATAGG
CCAATAAATA TTACTTTATC AAGAACCATC AACAAAATGA CGTTTAAAGA AAAATTTGAT
TTTTTAGTCG GCCTTTTAAC TGAACAAAAC GTTGAATTGG ACGAAAAAGC AGTTAATGAC
ATGGTCTCAA ACGCTGATGA TTTAATTTTA CTTTTAAAGG ATATTTCCCC TTCAATTTAC
GAAACCCTTG TTGATGAAAG AGATAAATAT ATGGCAAAAA ACCTCTTCGA ATCAAGTAAA
GGCAAAGAAA ACATCGTTGC AGTAGTTGGG GCTGGACACG TTCCGGGGAT TAAAAATTAC
CTTAAAAAAA TGGAATCCGG AGAAGACATT GAATTAAAAT CATTAATGGA AGTAAAAAAA
AAGTCAAACG TTTTAGGTAA AGTAATATCA ATTGCAATTC TTTTAATCAT ACTGTACGGA
TTTTACAGTG CATCGTCAAA TCTAGAAGCA CTAAAGACCT TAACGTTAGA ATGGGTACTA
ATAAACGGAT GTCTTTCATC ATTAGGTGTT CTTATAGCCA GAGGTAAATT TCAAACGATG
ATTGCAGCAT TTTTAGCAGC TCCAATCACA TCATTGATTC CTGTAATCGG TGCAGGCTAC
GTTGCAGGAT TAGTTGAACT TAAATTTAGG GATGTTTCTT TTAATGATAT TGGAAAAATG
ATGAATACAG AAAGTTTTAA AGAACTAATA GAAAATCAGG CGATTAGGGT TCTTTTAGTT
GCGGCACTTG CAAATCTTGG GAGCGCGATT GGAACTTTCT ATTTTGTACC GAGATTTTTA
TAA
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| Protein sequence | MYIRVNNGVT ECNIRLVGTA HVSDDSITDV ENAIVETDPE LVAIELDKDR FVAMFQNKKN
DVDLKSVIKQ GKVGIFIVHS ILANFQKNIG EQFGIKPGSE MKKATDLAIQ YGKPLSLIDR
PINITLSRTI NKMTFKEKFD FLVGLLTEQN VELDEKAVND MVSNADDLIL LLKDISPSIY
ETLVDERDKY MAKNLFESSK GKENIVAVVG AGHVPGIKNY LKKMESGEDI ELKSLMEVKK
KSNVLGKVIS IAILLIILYG FYSASSNLEA LKTLTLEWVL INGCLSSLGV LIARGKFQTM
IAAFLAAPIT SLIPVIGAGY VAGLVELKFR DVSFNDIGKM MNTESFKELI ENQAIRVLLV
AALANLGSAI GTFYFVPRFL
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