| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0623 |
|---|
| Symbol | |
|---|
| ID | 5738881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 571820 |
|---|
| End bp | 572626 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641283089 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001548672 |
|---|
| Protein GI | 159905010 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1967] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.532629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGGA TGCTATTAAT TAGGGAATTT ATATATCGGT ACTATATTTA CCCGATAGAT
ACCAAACAGG GCTATAATTT AATTCAGGAG ATTACTTACG GAATTTTACT CTTTGTAATG
GTTTATACGT TTTACCAAGT ATGTTTAAAA CTTAAAATAG CAATCGACCG TAGGTTTGCA
GAAGTTACTG TATTTTATGT TATTTTAATA ACGTTAATGA GGGCACTTGT TGATGCAGGA
CTTTTTCCAA GGCTTTATTA CACCGTTACG CCAGGAATAG TGGTTTCAGT TGGACTTTAT
TACATGCTTT CAATAATCAT TTCTGGAATT CTTCTAAAAA AGAAATATCA TCTGCTTTCA
ATTGCAATGG CGGTAGTACC AATTCTTTAC ATGCTTTTCG AGTTTTCGAG TAGAATAACT
CATCCGGAAG CAATTGTTTA TGTTTTTGGA ATTTTGATTG CAAGTTATTA TGCACTAATA
TATATCGTTG AAAAGCTAAG AAAAGTAAAA ATTGAGCGAA TAGACAAATA CGCTATATTT
TCACAGCTTG TAGATGCATC TGCAACATCT GTTGGAATTG GGATATTTGG ATACTGGGAA
CAGCACCCAG TTCCAAGATT TTTCATGGAT TATCTTGGCC CATACAGCAT AATACCTTTA
AAAATGCTTG TGGTGCTCTT GGTTTTAGAT ATATTCAACA AAGAAGTTAA AGACGATAAT
TTAAGGAATA TTTTAAAAAT AACGGTAATG GCTCTTGGAC TTGCGCCAGG TCTTAGAAAC
TTATTTAGGA CAGTCATGGG AGTTTAA
|
|---|
| Protein sequence | MNGMLLIREF IYRYYIYPID TKQGYNLIQE ITYGILLFVM VYTFYQVCLK LKIAIDRRFA
EVTVFYVILI TLMRALVDAG LFPRLYYTVT PGIVVSVGLY YMLSIIISGI LLKKKYHLLS
IAMAVVPILY MLFEFSSRIT HPEAIVYVFG ILIASYYALI YIVEKLRKVK IERIDKYAIF
SQLVDASATS VGIGIFGYWE QHPVPRFFMD YLGPYSIIPL KMLVVLLVLD IFNKEVKDDN
LRNILKITVM ALGLAPGLRN LFRTVMGV
|
|---|
| |