| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0588 |
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| Symbol | |
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| ID | 5738825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 539236 |
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| End bp | 540468 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 641283051 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001548637 |
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| Protein GI | 159904975 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0284636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTAA AAATTTTAAA AACGAATGAT TTATTTTGGT ATACTTTATC AAATATTATT
GGAAAGATGA TATTGGGCCT TTCGGGAATT TTTTTAGCCC GTTTTTTTTC TAAATTAGAT
TATGCAATTT ATGCAACAGC AACTGCTTTT GTGGGACTCA TTTATATTTT TGCACAATTT
GGAACAATTG ATTATGGTTT TTTTGAATTT TCAAAAGATA TGTATAATTC CGATAAAATT
TTGGCTAATA TATCCTATAT TTTCATGGTA TTTTATACTG TGGGGCTGAC AAGCATTCTT
TTTTATGATT TTATATATGG TTCTGGAGTA GTCATAGCAT TTTTGTTATA TATTAGATAT
TTTTTTGAAT GGATTTTTGG GGTTATTACT ATAAAATTGC AATCCAAAAA CCTATTTCCT
AAATTATCGA GAATGATTTT ACTTAAGTCT CTTTCAATCG CAATACCTTT ATTATTAATA
TTGATATTTA ATTTAAATTT GAACCATTAC ATTTTACTTT ACGTGTTATT AACCGTGTTA
ATTGTTAATA TCTTTGTATA TTTCAATTCA AATATATTGA TTTCCAACTT TTTGGATTTT
AAGCATAATT TATATTATGA GAAATACGTA TGTTCCCAAC TAAAACCTTT TTTTGTATCT
GGAATGATGT CTTATGTGTA TATGCAAAGT GATATACTAA TGATTTCAAT GATGGCGGGT
ACGGCGGCAG TTGGCGGATA TGCTGCCATG GTTGCATTAA TTTTTGGTTT ATATTTAATA
CCTGTATCTT TTCATAATTA TTATTTACCT AAAATTACAA GTAAGTATCA CGAAGGATTA
GAAAAAGAAT TAACTTCGTT AATTAAAGAA TTTAGGAATT TGGTATTATT TTCAATGACT
CCAATATCAT TAATCATGTT TTTTGGATCA GAACATCTGA TTAATCTAAT ATATGGTAGT
AAATACATTG AAAGTTCCAA TATATTAACA ATCATGTCTT TAGTATTACT AATACATAGT
TTTTCCGTAG TATATGGTGC ATTGATAACT GCCTCAGGGA ATCAAAAAAT AAGGAGTAGA
ATTCAGAGTG CGGTAGCACT ATTAAACATA GTTTTAAATA TATTTATTAT ACCGATTTAT
GGACCAATGG GTGCAGCAAT GACGACGTTT TTATCGGAAA TTATACTATT TATAGGATAT
TTTTTTTCAG GAATTAAATT AATACGGAAG TGA
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| Protein sequence | MQLKILKTND LFWYTLSNII GKMILGLSGI FLARFFSKLD YAIYATATAF VGLIYIFAQF
GTIDYGFFEF SKDMYNSDKI LANISYIFMV FYTVGLTSIL FYDFIYGSGV VIAFLLYIRY
FFEWIFGVIT IKLQSKNLFP KLSRMILLKS LSIAIPLLLI LIFNLNLNHY ILLYVLLTVL
IVNIFVYFNS NILISNFLDF KHNLYYEKYV CSQLKPFFVS GMMSYVYMQS DILMISMMAG
TAAVGGYAAM VALIFGLYLI PVSFHNYYLP KITSKYHEGL EKELTSLIKE FRNLVLFSMT
PISLIMFFGS EHLINLIYGS KYIESSNILT IMSLVLLIHS FSVVYGALIT ASGNQKIRSR
IQSAVALLNI VLNIFIIPIY GPMGAAMTTF LSEIILFIGY FFSGIKLIRK
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