Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0560 |
Symbol | |
ID | 5738686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 512084 |
End bp | 514207 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641283023 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001548609 |
Protein GI | 159904947 |
COG category | [R] General function prediction only |
COG ID | [COG1204] Superfamily II helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTTT TCGAAGTTTT AAAAGATTTT GGAATTGAAG AATTAAGACC GCCACAAAAG AAAGTTTTAG ATAACGGACT TTTAGATAAA ACTAAAAATT TCCTCGTATG TATTCCAACA GCAAGTGGAA AAACCTTAAT CGGTGAAATG GCTTTCATAA ATAACTTATT AACTGAAGAA AAGAAACCAA CCGGAAAAAA GGCAATATTC ATTGTTCCAT TAAAAGCTTT AGCTACTGAA AAGTTCGAAG AATTCAAGGA AAAATACGAG AAATATGGTC TTAAAATTGG TATTTCAATA GGCGATTTTG ATTCAAAAGA AGACCTCAAT AAGTACGATT TAATCATAAC AACTTCAGAA AAACTCGACT CATTAATCAG GCATAAAATA GACTGGCTAA AAGACGTTTC ATGTGTGGTA GTAGATGAAA TTCATTTAAT TGGTGATGGA GACAGGGGAG CTACTTTAGA AGTGGTTTTA ACGATTTTAA AATCATTAGA ATTGCAGATA ATAGGACTCT CGGCAACTGT TGGAAATCCT GGAGAACTCG CAGACTGGTT AAATGCTAAA TTAATTATTG ATTCCTGGAG ACCTATTGAG CTTAGAAAAG CTACTTTCTT TGAAAATGTA ATTGAATACA CAAATTCAGA AGAAAAGAAG GTTGAAAATG AACATAAAAA CTCGTTAAAT AATTTAGTTA TCGATACGGC AAAAGAAGAA GGCTCTTGTT TAATCTTTTG TTCTTCAAAA AGAAACGCAG TCGGGGAAGC TAAAAAGCAC GATGTAAGGA AGTATTTACA CCCCTTAGAA ATTGAAAAAT TAAACGAGGT TGCAGAAGAC CTTCTTGAGT CAGACTCAGA GGGAAAAACT GTTAAAACTC TTTCCGACTG CGTTAGAAAA GGAATTGCCT TTCACCATGC AGGACTCACG ACAAAACAGA GAAAAATTGT TGAAACTGCA TACAAAAACA GGATAATAAA AGTAATTTGC TGTACTCCAA CACTTTCAGC AGGTTTGAAC CTTCCTTGTA GAAGGGCAAT AATCCGAGAC GTTAAGAGAT TTTCTGACAG AGGAATGAAA TTTATTCCAG TTATGGAAAT TCAGCAGTGT ATTGGAAGAG CAGGAAGACC GGGGTTAGAC CCTTATGGTG ATGGAATAAT TGTTCTGAAG AAAAAAGGTG ATGTTACTGA AGCTTTGAAT CTTTTAAACG GAGACCCTGA ACATATCTAT TCAGGAATTG CTAACTACAA AAGTTTAGAA AAGCACGTTT TAGGTTTGAT TGCTTCCGAT ATTACAAGAA CCAAGACAGA ATTATTCAAA TTCTTAAAAA ATACGTTCTA TGCGTACCAG TACGAAGATT TCTTTAAAAT AAAAAGAACT GTTGAAGAAA TCCTGTTTGA CTTTAAAACT GCTAAATTCA TAAGACCTGA AAATGAAATC CTCGAAGTTA CTGCTTTGGG TTTGAGAGTA TCTGAGCTTT ATATCTCGCC AAGTTCGGCA AGACATATTT TAAACGGCTT GTCAAATCTT GAAGACTATT CGTTTGAAGA TCATATATTA TTGACTCTCT CAGGAACTCA CGAAATGAAA CCAAAATTGA GAATGCCTGA CAATGATTCG GATATTAGAT ATGAGCTTGA ATCTTTAGGT TATGAGTCAG ATGATGAATT GATTGATGAT TTCTTTTATT CAAGACTGTT TAAAGCTTGG ATTTCTGAAA AATCAGACGA AGAAATTCAT GAAGAATTTG CAGTAGAACC AGGAATTTTA CGATACAAAT TAGAGCAAAT GAACTGGATG ATGTATTCCG CAAAAGAGCT TCTAAGAATT TCAGGGAACC TAAAAGATTA CTGGAATGAG TTTTCAAATA TCGATGTCCG GCTAAAGTAT GGTGCATCAG TTGAACTTGT TGAACTTTTG AAAATAAAAG GAATTGGTCG AGTAAAGGCA AGAAAACTCT ATGATGTTGG TTTGAAGACA AGGGAAGATA TAAAAAAGAA TCCTTATCAA TTAGCCGCTC AACTGGGTAA TAAAACCGCT GCAAAGGTAC TGAAAATATT AAAAGTTCCT TACGATGTGA ATGTTTTTGA AGCAAAAAAA GGGCAGCAGA CTTTAATCTT GTAA
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Protein sequence | MSVFEVLKDF GIEELRPPQK KVLDNGLLDK TKNFLVCIPT ASGKTLIGEM AFINNLLTEE KKPTGKKAIF IVPLKALATE KFEEFKEKYE KYGLKIGISI GDFDSKEDLN KYDLIITTSE KLDSLIRHKI DWLKDVSCVV VDEIHLIGDG DRGATLEVVL TILKSLELQI IGLSATVGNP GELADWLNAK LIIDSWRPIE LRKATFFENV IEYTNSEEKK VENEHKNSLN NLVIDTAKEE GSCLIFCSSK RNAVGEAKKH DVRKYLHPLE IEKLNEVAED LLESDSEGKT VKTLSDCVRK GIAFHHAGLT TKQRKIVETA YKNRIIKVIC CTPTLSAGLN LPCRRAIIRD VKRFSDRGMK FIPVMEIQQC IGRAGRPGLD PYGDGIIVLK KKGDVTEALN LLNGDPEHIY SGIANYKSLE KHVLGLIASD ITRTKTELFK FLKNTFYAYQ YEDFFKIKRT VEEILFDFKT AKFIRPENEI LEVTALGLRV SELYISPSSA RHILNGLSNL EDYSFEDHIL LTLSGTHEMK PKLRMPDNDS DIRYELESLG YESDDELIDD FFYSRLFKAW ISEKSDEEIH EEFAVEPGIL RYKLEQMNWM MYSAKELLRI SGNLKDYWNE FSNIDVRLKY GASVELVELL KIKGIGRVKA RKLYDVGLKT REDIKKNPYQ LAAQLGNKTA AKVLKILKVP YDVNVFEAKK GQQTLIL
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