Gene MmarC6_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_0560 
Symbol 
ID5738686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp512084 
End bp514207 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content34% 
IMG OID641283023 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_001548609 
Protein GI159904947 
COG category[R] General function prediction only 
COG ID[COG1204] Superfamily II helicase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTTT TCGAAGTTTT AAAAGATTTT GGAATTGAAG AATTAAGACC GCCACAAAAG 
AAAGTTTTAG ATAACGGACT TTTAGATAAA ACTAAAAATT TCCTCGTATG TATTCCAACA
GCAAGTGGAA AAACCTTAAT CGGTGAAATG GCTTTCATAA ATAACTTATT AACTGAAGAA
AAGAAACCAA CCGGAAAAAA GGCAATATTC ATTGTTCCAT TAAAAGCTTT AGCTACTGAA
AAGTTCGAAG AATTCAAGGA AAAATACGAG AAATATGGTC TTAAAATTGG TATTTCAATA
GGCGATTTTG ATTCAAAAGA AGACCTCAAT AAGTACGATT TAATCATAAC AACTTCAGAA
AAACTCGACT CATTAATCAG GCATAAAATA GACTGGCTAA AAGACGTTTC ATGTGTGGTA
GTAGATGAAA TTCATTTAAT TGGTGATGGA GACAGGGGAG CTACTTTAGA AGTGGTTTTA
ACGATTTTAA AATCATTAGA ATTGCAGATA ATAGGACTCT CGGCAACTGT TGGAAATCCT
GGAGAACTCG CAGACTGGTT AAATGCTAAA TTAATTATTG ATTCCTGGAG ACCTATTGAG
CTTAGAAAAG CTACTTTCTT TGAAAATGTA ATTGAATACA CAAATTCAGA AGAAAAGAAG
GTTGAAAATG AACATAAAAA CTCGTTAAAT AATTTAGTTA TCGATACGGC AAAAGAAGAA
GGCTCTTGTT TAATCTTTTG TTCTTCAAAA AGAAACGCAG TCGGGGAAGC TAAAAAGCAC
GATGTAAGGA AGTATTTACA CCCCTTAGAA ATTGAAAAAT TAAACGAGGT TGCAGAAGAC
CTTCTTGAGT CAGACTCAGA GGGAAAAACT GTTAAAACTC TTTCCGACTG CGTTAGAAAA
GGAATTGCCT TTCACCATGC AGGACTCACG ACAAAACAGA GAAAAATTGT TGAAACTGCA
TACAAAAACA GGATAATAAA AGTAATTTGC TGTACTCCAA CACTTTCAGC AGGTTTGAAC
CTTCCTTGTA GAAGGGCAAT AATCCGAGAC GTTAAGAGAT TTTCTGACAG AGGAATGAAA
TTTATTCCAG TTATGGAAAT TCAGCAGTGT ATTGGAAGAG CAGGAAGACC GGGGTTAGAC
CCTTATGGTG ATGGAATAAT TGTTCTGAAG AAAAAAGGTG ATGTTACTGA AGCTTTGAAT
CTTTTAAACG GAGACCCTGA ACATATCTAT TCAGGAATTG CTAACTACAA AAGTTTAGAA
AAGCACGTTT TAGGTTTGAT TGCTTCCGAT ATTACAAGAA CCAAGACAGA ATTATTCAAA
TTCTTAAAAA ATACGTTCTA TGCGTACCAG TACGAAGATT TCTTTAAAAT AAAAAGAACT
GTTGAAGAAA TCCTGTTTGA CTTTAAAACT GCTAAATTCA TAAGACCTGA AAATGAAATC
CTCGAAGTTA CTGCTTTGGG TTTGAGAGTA TCTGAGCTTT ATATCTCGCC AAGTTCGGCA
AGACATATTT TAAACGGCTT GTCAAATCTT GAAGACTATT CGTTTGAAGA TCATATATTA
TTGACTCTCT CAGGAACTCA CGAAATGAAA CCAAAATTGA GAATGCCTGA CAATGATTCG
GATATTAGAT ATGAGCTTGA ATCTTTAGGT TATGAGTCAG ATGATGAATT GATTGATGAT
TTCTTTTATT CAAGACTGTT TAAAGCTTGG ATTTCTGAAA AATCAGACGA AGAAATTCAT
GAAGAATTTG CAGTAGAACC AGGAATTTTA CGATACAAAT TAGAGCAAAT GAACTGGATG
ATGTATTCCG CAAAAGAGCT TCTAAGAATT TCAGGGAACC TAAAAGATTA CTGGAATGAG
TTTTCAAATA TCGATGTCCG GCTAAAGTAT GGTGCATCAG TTGAACTTGT TGAACTTTTG
AAAATAAAAG GAATTGGTCG AGTAAAGGCA AGAAAACTCT ATGATGTTGG TTTGAAGACA
AGGGAAGATA TAAAAAAGAA TCCTTATCAA TTAGCCGCTC AACTGGGTAA TAAAACCGCT
GCAAAGGTAC TGAAAATATT AAAAGTTCCT TACGATGTGA ATGTTTTTGA AGCAAAAAAA
GGGCAGCAGA CTTTAATCTT GTAA
 
Protein sequence
MSVFEVLKDF GIEELRPPQK KVLDNGLLDK TKNFLVCIPT ASGKTLIGEM AFINNLLTEE 
KKPTGKKAIF IVPLKALATE KFEEFKEKYE KYGLKIGISI GDFDSKEDLN KYDLIITTSE
KLDSLIRHKI DWLKDVSCVV VDEIHLIGDG DRGATLEVVL TILKSLELQI IGLSATVGNP
GELADWLNAK LIIDSWRPIE LRKATFFENV IEYTNSEEKK VENEHKNSLN NLVIDTAKEE
GSCLIFCSSK RNAVGEAKKH DVRKYLHPLE IEKLNEVAED LLESDSEGKT VKTLSDCVRK
GIAFHHAGLT TKQRKIVETA YKNRIIKVIC CTPTLSAGLN LPCRRAIIRD VKRFSDRGMK
FIPVMEIQQC IGRAGRPGLD PYGDGIIVLK KKGDVTEALN LLNGDPEHIY SGIANYKSLE
KHVLGLIASD ITRTKTELFK FLKNTFYAYQ YEDFFKIKRT VEEILFDFKT AKFIRPENEI
LEVTALGLRV SELYISPSSA RHILNGLSNL EDYSFEDHIL LTLSGTHEMK PKLRMPDNDS
DIRYELESLG YESDDELIDD FFYSRLFKAW ISEKSDEEIH EEFAVEPGIL RYKLEQMNWM
MYSAKELLRI SGNLKDYWNE FSNIDVRLKY GASVELVELL KIKGIGRVKA RKLYDVGLKT
REDIKKNPYQ LAAQLGNKTA AKVLKILKVP YDVNVFEAKK GQQTLIL