| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0542 |
|---|
| Symbol | |
|---|
| ID | 5738631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 502270 |
|---|
| End bp | 504534 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641283005 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001548591 |
|---|
| Protein GI | 159904929 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.204061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT CTTTTTTCCT TTTTTTATTG CTCTTACTGA GTGTTATAGG TTCTGTTAAT
GCCATAGATA CAGTAATACA GAGTACGGAC CAAACTTCAA GTTTTAAAGT TGTTATTTCT
GAAACTACCA GTTCAGTAAT GATAAATGAT ACACTACTTG CCACTGCATG GACGGGTTCT
GCACCGACTG TTGTCGGTTG GACTGATGAT ACGATATATT TTGCATCTAA AAATGATATG
TATCGATTTG TTTCGGTTCC AGATATCACT TCATCGGCAT TAATGTTTAA CGGTAATTAT
GATGTCTATG AATATGGTGT ACGTCAAGAA TATACGTTAT ATAGGTTTTA CGGTTATTCT
TCAGGAAACA ATAACGTGCA TTCGGGAACT TTAAATATAA CTTCTGCTGG TGGTCTTTCC
GGTTATATCT TTGGGTATGG TAGCGGAACT TCTTCAATGG ATACTACTGA AACTTTGAAA
GTCAATGGGG ATACGGTAAT AGGAATTAAT TCTGGTTCTT ATACGTATTT TCAGCCTTAT
GCGTTTTCGG AATCTAATTC TGTTTATGTC TATACTAGAA GTAACGTAAT ATCCGGTGTT
TCTAAATTGG GTGGTACTGT TCTTGTAAAA GGATATCCCA CATATGAAAT ATTATCGGGT
GCGAGTGTTA CATTTACTGA ATTGTACGTT ACAGAACCCA TGAAGTATGA TTTAACAATT
GATTCTAACG TAGATGGAAT AACCGTTTAC AATGGGGAAA CTGATTTAGG AACTGCGAAT
GATGGAACTG TATTTCCTTT AATTGCTGGA ACTTATGATT TAACCTTTAT TAAAGAAGGA
TATTTTAATG AAACCCAAAC GGTAGAAATT ATTGATTCTG CAATTACTTT AACCGTTGAT
ATGGAAACTA CACATTTAGA AATTCCTGTA AGCATTTTTG ATTCTGAGGG TGGTTTAAAT
TCCGTTAATC TCTATATTGA TGATGAATTA TTTGGAACTG TTTCAAATAA TCAAGATGTT
TCACTTCCAA GAGGAACACA TGAATTAATC TTCGAAAAAT CAGGTTACTG GAGTGAAACA
AGAACGGTTA CAGTTGATGA ACTTTTAACT GAATTATCGA TTAGAATGTA TCCTGAATCA
GTATTCTTTA AAATTTCAAA TACTCCTTCA TTAATTCAAA CTTATTCGAA TTCTGAAGTA
AATATTGCAC TAAACATTGA TCCAAACGAT TACGCTTACG GTGTTAAGTT ATACTTGACA
GGTCAGGAAG TTTTAGATGT TAGGGATTCT TCAAATGTTC AAATTTCAAA ACAGGATAGT
TACTACTTGT TAGATGACTT TTCAAGTGCA AAAACAGTAA ATGTAAAAAT TAATTCAGGT
ACTACTTTAG GTACAAACAG TTTAGCTGTA AGAGTTACGG GATATAATGT AATAGGTACT
GAGTTTGTAA CGGATTCTAC AATTAATTAC GAAATATTAA GGCTTCCTTT GTCTTTAACT
GTTCCTAGTT GGTGTATAGG AAGTAATTCC CTGACAGTTA TAGAAACAGA AGGAATTACA
AGAACCGTAG TAATTAAACT TGCAGATTTA GACGGAAACA TATTACAATC TGACTCTCAC
ACATTCGAGG GTTTTGAAAC ATATAAATTT ACTATTAACT TTGAAGAACC CGGAGATTAC
AAGCTGTATG TTCAATCAGG GGATTTAATT AACACTTATA TTGATGTATC GGTTGATAAT
CCTATATCAC TTACTACAAA AACACTTACT GTGAGTGAAG GTAGTGTCGC AACTGCAAAA
GTTTTAATTG AAAACTCATA TTCTGAACCG CAGTATTACA GAATAACGAT TGAAGGAGAT
CCTTTAGTAA ATTCTACAAA AGTAGACTTT TCAATTTCTC CAGGAAGTAC TAAAGAACAG
TCAATATCAT TTACTTTACT TGATGAATTA GATTATGACA GTTATTCTCT ACCTTTAAAG
GTTTATCTGG TGGAAGAATC CGGTTTAACT GAAATCTATT CAGATAGCGT TATATTGAAT
ATTGGTTCAA GCGGTTCATT TATTCCTTTC CTTGATTTCG GGGATGATGG AATAATTGAT
ACAGTAATTA CATTTGTCAT AGATAATCCG GTAATTGATG GAATAATAAT CATCGCAGGT
CTTGGAGTTT TCATATTTTC AGGAAGAAAA AAAGGTAAAA AACCTGTAAA AACCATTAAA
AAACCTGTTA TAACTAAAGG GGGTAAAAAG GGTGGTAAGA AGTGA
|
|---|
| Protein sequence | MKKSFFLFLL LLLSVIGSVN AIDTVIQSTD QTSSFKVVIS ETTSSVMIND TLLATAWTGS
APTVVGWTDD TIYFASKNDM YRFVSVPDIT SSALMFNGNY DVYEYGVRQE YTLYRFYGYS
SGNNNVHSGT LNITSAGGLS GYIFGYGSGT SSMDTTETLK VNGDTVIGIN SGSYTYFQPY
AFSESNSVYV YTRSNVISGV SKLGGTVLVK GYPTYEILSG ASVTFTELYV TEPMKYDLTI
DSNVDGITVY NGETDLGTAN DGTVFPLIAG TYDLTFIKEG YFNETQTVEI IDSAITLTVD
METTHLEIPV SIFDSEGGLN SVNLYIDDEL FGTVSNNQDV SLPRGTHELI FEKSGYWSET
RTVTVDELLT ELSIRMYPES VFFKISNTPS LIQTYSNSEV NIALNIDPND YAYGVKLYLT
GQEVLDVRDS SNVQISKQDS YYLLDDFSSA KTVNVKINSG TTLGTNSLAV RVTGYNVIGT
EFVTDSTINY EILRLPLSLT VPSWCIGSNS LTVIETEGIT RTVVIKLADL DGNILQSDSH
TFEGFETYKF TINFEEPGDY KLYVQSGDLI NTYIDVSVDN PISLTTKTLT VSEGSVATAK
VLIENSYSEP QYYRITIEGD PLVNSTKVDF SISPGSTKEQ SISFTLLDEL DYDSYSLPLK
VYLVEESGLT EIYSDSVILN IGSSGSFIPF LDFGDDGIID TVITFVIDNP VIDGIIIIAG
LGVFIFSGRK KGKKPVKTIK KPVITKGGKK GGKK
|
|---|
| |