| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0529 |
|---|
| Symbol | |
|---|
| ID | 5738597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 489976 |
|---|
| End bp | 490461 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641282992 |
|---|
| Product | 3-isopropylmalate dehydratase, small subunit |
|---|
| Protein accession | YP_001548578 |
|---|
| Protein GI | 159904916 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
|---|
| TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA CAGGTAAGGT GCACTTATTT GGGGATGACA TCGACACAGA TGCGATAATT
CCCGGCGCTT ATTTAAAAAC AACTGATGAA TATGAGCTTG CATCACACTG CATGGCAGGA
ATCGACGAAG ATTTTCCAGA AATGGTCGAA GAAGGCGACT TTTTAGTAGC AGGTGAGAAT
TTCGGGTGCG GAAGTTCAAG AGAGCAAGCT CCAATTGCAA TAAAATACTG CGGAATCAAG
GCAATAATTG TTGAGAGTTT TGCAAGAATA TTTTACAGAA ATTGCATAAA TCTTGGAGTT
TTCCCAATTG AATGCAAAGG AATTTCAAAA CACGTGAAAG ATGGGGATTT AATAGAACTA
GATCTCGAAA ACAAAAAAGT AATTTTAAAA GACACGGTTC TAAACTGTCT CCTTCCAACT
GGGACTGCAA AAGACATAAT GGATGAAGGC GGGCTTATAA ATTACGCAAA GAAACACAAA
AACTAA
|
|---|
| Protein sequence | MKITGKVHLF GDDIDTDAII PGAYLKTTDE YELASHCMAG IDEDFPEMVE EGDFLVAGEN
FGCGSSREQA PIAIKYCGIK AIIVESFARI FYRNCINLGV FPIECKGISK HVKDGDLIEL
DLENKKVILK DTVLNCLLPT GTAKDIMDEG GLINYAKKHK N
|
|---|
| |