| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0484 |
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| Symbol | rfc |
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| ID | 5738485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 439421 |
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| End bp | 440368 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641282946 |
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| Product | replication factor C small subunit |
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| Protein accession | YP_001548534 |
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| Protein GI | 159904872 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.362585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGAAAC CATGGGTTGA AAAATACAGG CCAGAAACAC TTCCTGAAGT CGTTGGACAC
CACGAAATTA TCAAAAGACT TACAAATTAC GTTGAAAAAA AGTCAATGCC CCACTTACTC
TTTAGTGGTT CTCCAGGGGT TGGAAAAACA ACTGCAGCAC TTGCTCTTGC AAAAGACCTC
TATGGCGATA CTTGGAGGGA AAATTTCCTT GAATTAAACA GTTCTGATGA AAGGGGGATC
GACGTAATCA GAACCAAGGT AAAAGACTTT GCAAGAACAA AACCTATTGG GGATGCCCCA
TTTAAAGTCA TATTTTTAGA TGAAAGTGAT GCTTTAACGT CAGATGCTCA AAACGCACTT
AGAAGAACCA TGGAAAAATA TTCTGATATT TGCAGGTTTA TTTTAAGCTG TAACTATCCA
AGTAAAATTA TTCCTCCAAT TCAGTCAAGA TGTGCAATCT TTAGATTTTC ACCGTTAAAA
ACTGAAGATT TAGTTGAAAA TTTAAAAGAT ATTTCTGAAA AAGAAACTTT AACTCTTGAA
AAAGGAGGAA TTGATGCGAT AATCTATGTT TCAGAAGGGG ACATGAGAAA AGCAATCAAT
GTTTTACAGA CCGCTGCTGC AGTTTCTGAT ACAGTAACTG AAGAAATAGT TTACAAAGTT
GCTTCTAAAG CGAGACCTGA TGAAATCAAA AAAATGACCC AACTTGCATT GAATGGAAAA
TTCGTTGAAG CACGAGAACA ACTCTATAAC TTGATGATCG ACTGGGGAAT GAGTGGAGAA
GATATATTAA TTCAGGTATT TCGGGAAGTT CCAAATTTAG ACATTTCTGA AAAAGAAAAA
GTGCATTTAG TTGAAGCAAT TGGTGAATGT GACTTTAGAA TTGTTGAAGG TTCAAATGAA
AGAATACAGT TAAGCGCACT CCTTGCAAAA ATGGGAATTT TAGAATAA
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| Protein sequence | MQKPWVEKYR PETLPEVVGH HEIIKRLTNY VEKKSMPHLL FSGSPGVGKT TAALALAKDL
YGDTWRENFL ELNSSDERGI DVIRTKVKDF ARTKPIGDAP FKVIFLDESD ALTSDAQNAL
RRTMEKYSDI CRFILSCNYP SKIIPPIQSR CAIFRFSPLK TEDLVENLKD ISEKETLTLE
KGGIDAIIYV SEGDMRKAIN VLQTAAAVSD TVTEEIVYKV ASKARPDEIK KMTQLALNGK
FVEAREQLYN LMIDWGMSGE DILIQVFREV PNLDISEKEK VHLVEAIGEC DFRIVEGSNE
RIQLSALLAK MGILE
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