| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0456 |
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| Symbol | |
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| ID | 5738413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 418045 |
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| End bp | 419685 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641282918 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001548506 |
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| Protein GI | 159904844 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.441946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGTT TTAAAAATTT AGGTTTATCT GACGAGATAA TAAAAGCGTT AGAAAAGAAA
GGTTTCACAA ACCCAACCCC TATTCAAGAA CAAGCAATCC CTATTTTAAT TGAAGGAAAA
AGAGACGTTG TCGGCCAAGC TCAAACAGGT ACTGGAAAAA CCGCAGCATT TGGTATCCCT
ATTTTAGAAA CAATTGACGA AGGCTCAAGA AACACACAAG CACTTATTTT AGCACCTACG
AGAGAACTTG CAATACAGGT TGCAGAAGAA ATCGATTCAA TCAAAGGTTC AAAAAGATTG
AACATTTTCC CAGTATACGG CGGTCAGTCA ATTGACAGAC AGATAAGAGA ATTAAAAAGA
GGAGTTCAGA TTGTTGTTGG AACCCCTGGA AGAATACTCG ACCACATCTC AAGAAGAACA
ATAAAACTCG AAAACGTTTC ATACGTAGTT TTAGACGAAG CTGACGAAAT GTTAAACATG
GGATTCATTG ACGATGTAGA AGAAATCTTA AAATCAGTAA GCACTGAAAA AAGAATGCTT
TTATTCTCAG CAACACTTCC CGACAGCATC ATGAAACTTG CTAAAAACTA CATGAGAGAA
TACGACATCA TCAAAGTTAA AAGACAGCAG CTTACAACAA CTTTAACTGA TCAGTCCTAC
TACGAAATTC ACTCAAGAGA TAAATTTGAG TTACTTTCAA GAATTATCGA TGTAGAAAAA
GAGTTTTACG GTTTAATCTT CTGTAAAACA AAAGCAGACG TTGATGAAAT TTCAAGCAGA
TTAACAGAAA AAGGATATGC TGCAGAAGGT CTTCACGGAG ATATGACCCA AGCACAAAGA
GAAAAAACAC TTGAGAAATT TAAAGCAAGA AAAATCAACG TTCTCGTAGC AACTGATGTT
GCAGCAAGAG GAATCGATAT CAACGACTTA ACACACGTTG TAAACTATGA TATTCCACAA
AACCCTGAAT CATACGTTCA CAGAATTGGA AGAACCGGAA GAGCTGGAAA ACAAGGTTAC
GCAGTTACAT TTGTAGAACC TTCGGAATTT AGAAAATTCA AATACATTCA GAAAATTGCA
AACACTGAAA TCAGAAAAGA AGAAGTTCCA GACGTTAAAG ACATAATTGG AGCTAAGAAA
AGAAAAATTG TTTCAGGAAT AAAAGAAGTT TTAGAATCTG GAAAATACAA CGACTGCGAA
AAAATGGCTG CTGAGTTATT AGAAGATGCA GATCCACAAG AAGTTCTTTC AGCAGTTTTA
AAATACGCAT TGAAAGATGA ATTAAGCGAA TCAAACTACA AAAGAATCGG AAAACCTGCA
AACAGGGAAG GGAGAGACAG GGGCGAAGGA AGAAGTGAAG GTAGACGAGA CAGGGGCGAA
GGAAGAAGAT CCTTTGTATC TGGCGGAAAC GTTAGGTTAT TCGTAGCTCT TGGTAAACTC
GACAAAATGA ACCCTAAAAA GTTAGTTGAC CACATCTCAA AAAAATCAGA TGTTAAAGGA
AGAGACATCG ACGATGTAAA AGTATTTGAG AAGTTCTCAT TTGTAACCGT ATCTTCAGAC
AATGCAGAAA TAATCCTCGA TTCATTCAAA CATGAAAAAA GAGGAAGAAG ATCAATAATT
GAAGTTGCAA GCGGCAACTA A
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| Protein sequence | MESFKNLGLS DEIIKALEKK GFTNPTPIQE QAIPILIEGK RDVVGQAQTG TGKTAAFGIP
ILETIDEGSR NTQALILAPT RELAIQVAEE IDSIKGSKRL NIFPVYGGQS IDRQIRELKR
GVQIVVGTPG RILDHISRRT IKLENVSYVV LDEADEMLNM GFIDDVEEIL KSVSTEKRML
LFSATLPDSI MKLAKNYMRE YDIIKVKRQQ LTTTLTDQSY YEIHSRDKFE LLSRIIDVEK
EFYGLIFCKT KADVDEISSR LTEKGYAAEG LHGDMTQAQR EKTLEKFKAR KINVLVATDV
AARGIDINDL THVVNYDIPQ NPESYVHRIG RTGRAGKQGY AVTFVEPSEF RKFKYIQKIA
NTEIRKEEVP DVKDIIGAKK RKIVSGIKEV LESGKYNDCE KMAAELLEDA DPQEVLSAVL
KYALKDELSE SNYKRIGKPA NREGRDRGEG RSEGRRDRGE GRRSFVSGGN VRLFVALGKL
DKMNPKKLVD HISKKSDVKG RDIDDVKVFE KFSFVTVSSD NAEIILDSFK HEKRGRRSII
EVASGN
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