| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0454 |
|---|
| Symbol | |
|---|
| ID | 5738409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 415308 |
|---|
| End bp | 416954 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641282916 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001548504 |
|---|
| Protein GI | 159904842 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0303969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGTTT ACGATTTTGA TATAAATCTT CAAAAAGTAT TTTACAATTA TTTTAAGGAT
ATTAAAAGTG CTAATTGGAA AAACTGGTTA GATATATCTT CAGTCGAAGA ATACGAAGAA
GCAATTTTTA AAAATTCGAA ACTTTCAAGC GATATTCTTG AGGAAATTCA TTTAAAAAAA
ACTGATCCAA AAGATTTTTC ATTAAATCCA AAAACTTTTT TAAAAGAAAG GCTTGAAAAA
GATGATGTAG CTAATTTATT TTTAAAAGAC ACTGCAATTG TAACTCACAC TTCTGGAACT
TCTGGCGGAG ATATTACAAA ATTAAAGTGG TTTTTGATTT CTGATGATTT TTTAAAACGA
GTGTGGGTTC CCGGAATGCA GGCGATATTT GAATCAAGCG GCCTATCAAA AAATAAGTCG
GCAGTAATTT TTGTTCCAAG CCGGATCAAG GTTGATGGAC TTTCAAAAGT GGAAGATCTA
AATCTTATCC GTCTTTACAC GTCAGAATTT TCTCAAAGGG TTGTTTTGTC ACACATTAAG
CCGTCTTCAT ATTTAATCGA CGAATACAAA AATGCGCTAA ATATACTGAC AATTTCAAAA
ATACTGACTC TTGATGATAT TTCGGTAATT TCTGCACCCG CAGCAACGAT TATAAAATGG
GCAGATCTTG ATAAATTAAA AATGGGTCTC GAAAACTCGA TAAACTCAAT CGATTGGGAT
AATTTAGAGG ATGAAAATTC AGAAGTTTTC GAACTAAAAA AATTGTACGA AAGAATAGGT
CTTGATAATT TTGCAATTGA AATTCAAAAC AGGCTTTCAG AGGCACTTAA AGATTCTACG
CTGATATTTA GTATAACGTC TCTTTCAAAA GACGAATGGT CAAAAATTAG GAAATTTATG
GGCTGGAATG TTGGCGAAGA AAAGTTTACA AACCTTTATG TTGGAAGCGA AATCGGGCCG
TTTGCAGGGG GGATAAATAA GGAAGATAAT TATCGAATGT ATGTATTTCC TTTAACCTAT
CCGGTAATTG AGAGAAAAGG AAAAAAAGAA TTTATTTCTA AAACTAAAGA TAATTATGGG
GTTTTACTTG TTTCAAGGCC GGGTTCAATT CCATTAATAA ATATTGATAC TGGTGATGTA
ATTACCATAT TAAATCAAGA GGGGATTCCA AAAATTTCGG GTGAAATTTT AAGATCTGGA
TTTAAATTAA AATTAGAAAT GAAACTCGAA GGTTTTCCAA AAAATACTGA ATTTTTCGCA
GGAGATTACT TTGATATTGG TGGAATTGAG GTATTTAATC CTAGAAAGAT GGTTTCATGT
ATGGGGCAGA GATTTGGATT AGAAAAAGAC AATCCCGTAC TTTTGGTATC TGGTGAGTCA
TATAAAATGG TTTTACCGCT TGAAAATAAT AAAAATGTGC TAATTGACAA AATAAAAGAA
GAAATGCCAA ACTGTTCTAT CGGGCAGGAT ATCGAAGAAG CTTTGAAAAA TGAGAAAATT
TCACTCGAAA TGGGAAATAC AAATGTCAAA TCTTCAATTG ATCATGCAGA ACTTTTAGAA
AAAGTTAAAA AAGGCGATCT TCCAAAAGGA GTTCTTAAAA AATGGCCGTT TTACATTTTA
AATTTACCAA AAAATTCGGA AATTTAA
|
|---|
| Protein sequence | MSVYDFDINL QKVFYNYFKD IKSANWKNWL DISSVEEYEE AIFKNSKLSS DILEEIHLKK
TDPKDFSLNP KTFLKERLEK DDVANLFLKD TAIVTHTSGT SGGDITKLKW FLISDDFLKR
VWVPGMQAIF ESSGLSKNKS AVIFVPSRIK VDGLSKVEDL NLIRLYTSEF SQRVVLSHIK
PSSYLIDEYK NALNILTISK ILTLDDISVI SAPAATIIKW ADLDKLKMGL ENSINSIDWD
NLEDENSEVF ELKKLYERIG LDNFAIEIQN RLSEALKDST LIFSITSLSK DEWSKIRKFM
GWNVGEEKFT NLYVGSEIGP FAGGINKEDN YRMYVFPLTY PVIERKGKKE FISKTKDNYG
VLLVSRPGSI PLINIDTGDV ITILNQEGIP KISGEILRSG FKLKLEMKLE GFPKNTEFFA
GDYFDIGGIE VFNPRKMVSC MGQRFGLEKD NPVLLVSGES YKMVLPLENN KNVLIDKIKE
EMPNCSIGQD IEEALKNEKI SLEMGNTNVK SSIDHAELLE KVKKGDLPKG VLKKWPFYIL
NLPKNSEI
|
|---|
| |