| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0444 |
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| Symbol | |
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| ID | 5738387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 405025 |
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| End bp | 406470 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 641282905 |
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| Product | tetratricopeptide domain-containing protein |
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| Protein accession | YP_001548494 |
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| Protein GI | 159904832 |
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| COG category | [K] Transcription |
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| COG ID | [COG4271] Predicted nucleotide-binding protein containing TIR -like domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.317749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAA GGGTCTTTAT AGGATCATCT GTTGAGGGAG TAAACGTAGC AGAAGCAATT
CAGAGGCACT TAAAAGACGA TGCAGAGGTT AAAATTTGGC ATCAAGGTGT TTTTGAGCTA
TCCAAAACAT CTATTGAATC ATTGGAAAAT GCATTGGATA GTTTTGATTT TGGTATTTTC
GTGTTTAATA ATGAAGATAT ACTTAAAATC AGGGGTGAGG AAAAAAGTGC AGTTCGGGAC
AACTTAATTT TTGAATTTGG ATTATTTATT GGTAAATTAA CTCGTGAAAG AGTATTTTTT
GTGATTCCTT CTGGTTCAGA CCTTCATTTA CCAACGGATT TACTAGGAAT AACTTATGGG
CAGTATGACG CAAATCAATC TGACGACAAT ATAGATACTG CAACCAAGAT TTTTTCAAAT
CAGGTAAGAA TCCCGATAAA AGCATTAGGT CGATTTAAAA ATTATGCTGA CAACCCCGGA
TCATTGGACT CAAAACAGAA AAAAGAATAT AAATTTGAGT GCGATGGATG GCATGACGAT
TTTATAGAGA AAAATTATAC TTTAGCCAGA GAAAAATTGA TATCATTATG TAAAACTGAA
AAAAATGCAA ATAATAAACT TCCTCATGAG ATGTGGATTG CATACTGCGA CTTTAAACTC
GATAAATTCA AAGGCATTGA AGAACTTGAT AAATTATTAA ATGAAAATAT GGGTAATATT
GAAGTTAATA AGTTTATATC TGACATATAT TCTCGAGAAA ATTATTTGGA TAAATCAATA
TCTATTTTAA AAAATGCTAG AAAAAAATTT GATAATGACC CTTCATTAAT AACCCGTCAA
GCTAACATTT TAAAACGAAC TGAAGGATTA AATCAGGCAT TGACTTTTCT TGAGGATAAT
AAAGAAAAAA ATAGTGCAAG TATTGATTTA TTGATATATT ATTACTTATT AGAAAAAAAA
GAAGATGAAA AGGCTAGAAA GTATATCCAC AGTATTTATC AGAAATTTCC AAATAATGAT
CAAATTAAAT ATAGGTACGC CAGATTAGCA ATTGACCGTA GAGAAAACGA AATAGCCCTT
TATTTACTGG ATAACCTTAC TAAAAAATAC CCTGAAAATC CAGATTATTG GGCATTTTTA
GGTAATTGCG CAATATTTTT TGATTATAAC GACCTAGCAT TATCCGCATA TAAAAAAGCG
GAAGAATTGA CCAACTCTCA ACAAAGTTGG ATTGTAGGCA ATATTGGAAA TGTATATAAT
AATCGAGGAT TTTATTCTGA AGCTATTGAA TATTTAAAAA GAGCAATAGA TTTGGATAAA
GATGATGATT ACGCATATGA TAGAACTTCT TCAGCAATTA AAAATAGATC CAAGGAAAAG
GAAAAAATTA AAGAATCTTG TGCACAAGGT CAAAAACTAT TAAATGAATA CATTATTGAA
GAATAA
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| Protein sequence | MKPRVFIGSS VEGVNVAEAI QRHLKDDAEV KIWHQGVFEL SKTSIESLEN ALDSFDFGIF
VFNNEDILKI RGEEKSAVRD NLIFEFGLFI GKLTRERVFF VIPSGSDLHL PTDLLGITYG
QYDANQSDDN IDTATKIFSN QVRIPIKALG RFKNYADNPG SLDSKQKKEY KFECDGWHDD
FIEKNYTLAR EKLISLCKTE KNANNKLPHE MWIAYCDFKL DKFKGIEELD KLLNENMGNI
EVNKFISDIY SRENYLDKSI SILKNARKKF DNDPSLITRQ ANILKRTEGL NQALTFLEDN
KEKNSASIDL LIYYYLLEKK EDEKARKYIH SIYQKFPNND QIKYRYARLA IDRRENEIAL
YLLDNLTKKY PENPDYWAFL GNCAIFFDYN DLALSAYKKA EELTNSQQSW IVGNIGNVYN
NRGFYSEAIE YLKRAIDLDK DDDYAYDRTS SAIKNRSKEK EKIKESCAQG QKLLNEYIIE
E
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