| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0418 |
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| Symbol | |
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| ID | 5738338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 385044 |
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| End bp | 386030 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641282880 |
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| Product | integrase family protein |
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| Protein accession | YP_001548469 |
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| Protein GI | 159904807 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0307048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTAG TCAGTAAATT TTTAGTAGGC GCTGGAAAGA GAGACGCAGT AACTAAAACC
CCTGCGATGA ATAAATGGAT CTCCGTATTT AGAGAAGAGC GAGAATTTGA CGGAATCAAA
GAGAACACGA TAATCGGAGA TCTTACTAAA CTAGGGGTTT TCTTAGAATT TGCACAGCAG
AGGCTTGAAA AAGAGCCAGA TGAACTTTAT AAAACTGATT TCATTAAATT TTTTAATTAT
CTAGAAAAAG AGAGAAAAAT TTCAAAAAAT ACTCAGAATC GATACTTCAA TTTATTAAAG
GTATTTTATA GGGCTTTTAA ACTCGATAAT TTCATGGATT TCAGGGATGA ATCAAACGAG
AGAAAGAGGT TTTCAAGTTC AAGAATTGAA GTTAAACACT ACGATGCAAT AACTGAACAG
GACCTTAATT TAGTGATTGC AAAGATCTTT GAAAACCAGA GTAGTACAAA AATAAGGGAC
CTCGTAGTTA TACGAATGCT CTGGGATACT GGTGCAAGAG TTTCTGAAGT TTTAAACTTA
AAATATGAAG ATTGCGACTT TGAAAACGGG GAATTTCGAC TTAGAAATAC AAAATCTCAT
GAAGAAAGAA AAGTGGTCTG TTCTAATGAC ACTTTAGAGC TTTTAAAGTG TCTTGCAAGT
TACAATTTCA AAAAAGAGCC AAAAGACTAT CTTTTCCAGT CAACTAATCA AGAAAATCTT
GGAAAAATTG CGGATAGAAA CCAGATTACC AGGACCTTTG GTCGAGCAGT TGATAAATTA
AAAGAAGAAG AAAAGATCCA GCAAAATAAA CGATATGTTG TGCACTCTTT AAGGCACGGA
AGAGCAGTGG ATCTATTGAA TAAGGGAGTT CCAATTGATG TTGTAAAAGA GATTCTGGGC
CACAGATCTT TAGAAACAAC GCTCTATTAT TCGCATTCAA GACAGAGAAA AGAGCAGATG
CTTCAAGATA TTAAAAAATT ACTTTAA
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| Protein sequence | MDVVSKFLVG AGKRDAVTKT PAMNKWISVF REEREFDGIK ENTIIGDLTK LGVFLEFAQQ
RLEKEPDELY KTDFIKFFNY LEKERKISKN TQNRYFNLLK VFYRAFKLDN FMDFRDESNE
RKRFSSSRIE VKHYDAITEQ DLNLVIAKIF ENQSSTKIRD LVVIRMLWDT GARVSEVLNL
KYEDCDFENG EFRLRNTKSH EERKVVCSND TLELLKCLAS YNFKKEPKDY LFQSTNQENL
GKIADRNQIT RTFGRAVDKL KEEEKIQQNK RYVVHSLRHG RAVDLLNKGV PIDVVKEILG
HRSLETTLYY SHSRQRKEQM LQDIKKLL
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