Gene MmarC6_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_0394 
Symbol 
ID5738298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand- 
Start bp357649 
End bp358287 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content34% 
IMG OID641282858 
Producthypothetical protein 
Protein accessionYP_001548447 
Protein GI159904785 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.625345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TAATATTGAG GATTATAATT TTTACTTTAG GACTTTTTAT CATGGCTTTT 
GGGGTATCTT TATCAGTTAA GGCAAATCTT GGAATATCTC CAATATCCTG TGTTCCGTAC 
GTATATAGTT GTAAGTTTCC ACTTACTTTG GGTCAAATAA CAATATTGTT CAATGCCGTG 
CTAATAATGT TACAAATGAT TTTGCTTCGC CGCAACTATC GTTTAATCTT GGTGCAGTTG 
CCTTTTGTAT TTGTTCTTGG TTTATTTATC GATTTAACAA TGTACATGAT TTCTAATCTG 
TATATCCCAA ATTATGTATG GCAGGTAGCA CTATGTTTAC TCAGCTGTAT CGCAATTGCA 
TTTGGTGTTT TTCTGGAGGT AAAGGCAAAA CTTATTTATC TTCCTGGAGA GGGTTTAGCA 
ATGGCAATTT CTGACATTTT CAAGAAAGAA TTCGGGAAAG CAAAAATCGG AGTCGATGTT 
TCAATGGTTG TTGTAGGCAT TGTAAGTTCG TTTATGTTTT TGCACCAAAT ACGAGGAATA 
GGTGAAGGAA CCATTATTGC TGCAGTAATG GTTGGTTGCA TTGTAAAATT CTTTAATAAT 
ACCTTATCCT CAGTAATTGA GGATATAAAA TTGGTTTAG
 
Protein sequence
MNKLILRIII FTLGLFIMAF GVSLSVKANL GISPISCVPY VYSCKFPLTL GQITILFNAV 
LIMLQMILLR RNYRLILVQL PFVFVLGLFI DLTMYMISNL YIPNYVWQVA LCLLSCIAIA 
FGVFLEVKAK LIYLPGEGLA MAISDIFKKE FGKAKIGVDV SMVVVGIVSS FMFLHQIRGI 
GEGTIIAAVM VGCIVKFFNN TLSSVIEDIK LV