Gene MmarC6_0346 details

Gene Information

• Locus tag: MmarC6_0346
• ID: 5739104
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: -
• Start bp: 310013
• End bp: 310639
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641282810
• Product: AMMECR1 domain-containing protein
• Protein accession: YP_001548399
• Protein GI: 159904737
• COG category: [S] Function unknown
• COG ID: [COG2078] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00296] uncharacterized protein, PH0010 family

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 0.325278
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGGGAT TTAAATTGAA ATTAAATCTT GAAGAGGGGA CTTTAATAAT CAGGTATGCT 
CGAAATATCC TTGAACAGTA TTTAAAAGGC GAAGAGCCGG ATATTCAAAG TTATCCTGAT 
AAATTTAAAA ATGTTCTTGG AATTTTTGTA TCGCTACATA CGCATCCAGA ACATGATTTA 
AGGGGTTGTA TTGGAATTCC TGAACCTATA ATGTCGCTAA TTGACGCGAT AAAAGAAACA 
TCGATAAGTG CCGCAGTCCA TGACCCCAGA TTTCAACCAT TGAAGCATCC TGAGCTTAAA 
GATACGATTA TAGAAGTTAG CGTTTTAACA ACTCCTGAAG ATGTTGATGT TCAAGATTCG 
ATGGAATATT TGGAAAAACT AAAAGTCGGA AGAGACGGAC TAATTATTGA ATTTGGGCCT 
TACAGGGGAT TGTTACTTCC ACAGGTGGCT GTAGAATATA ACTGGGATAT GAAGCAGTTT 
TTATCGAACC TCTGTTTAAA AGCAGGACTT CCTGTAACGG CATGGATCGA TTATGACGTT 
AAAATAAAGT CTTTTCAGGC ACAAGTGTTC GAAGAGCTTG TACCGGGTGG CCCAGTTGTT 
GAGAAATCAA CATATACTGG ATGTTAA 

 

Protein sequence

MRGFKLKLNL EEGTLIIRYA RNILEQYLKG EEPDIQSYPD KFKNVLGIFV SLHTHPEHDL 
RGCIGIPEPI MSLIDAIKET SISAAVHDPR FQPLKHPELK DTIIEVSVLT TPEDVDVQDS 
MEYLEKLKVG RDGLIIEFGP YRGLLLPQVA VEYNWDMKQF LSNLCLKAGL PVTAWIDYDV 
KIKSFQAQVF EELVPGGPVV EKSTYTGC