Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0287 |
Symbol | |
ID | 5738936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 261807 |
End bp | 262361 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641282751 |
Product | putative RNA-processing protein |
Protein accession | YP_001548340 |
Protein GI | 159904678 |
COG category | [R] General function prediction only |
COG ID | [COG1094] Predicted RNA-binding protein (contains KH domains) |
TIGRFAM ID | [TIGR03665] arCOG04150 universal archaeal KH domain protein |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.522935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGAGA ATGTGGAAGT AGTGAAGATT CCAAAAGAGA GAACAGGTAT CCTTATTGGA ACTCACGGAG AAGTTAGAAA ACAGCTTGAA AGTGAGCTTG GAGTTGAATT AGAAATCGAT TCCGAAGGAG AAGTTAGTAT TTATTCAACA GAAGATCAAG AAGACCCTCT GGCACTCTGG AAAGCAAGGG ACATTGTAAA AGCTATTGGA AGGGGATTCA ATCCTGAAAA AGCTTTAAAA CTGGTTTCAG ATGAATATGC ATTCGAAGTA ATTGATATTT CAGAATATGG AAATTCCGAT AAAGCCCTTC AAAGATTAAA AGGAAGAATT ATTGGAAGTG GCGGAAAATC AAGAAGATAC ATTGAAGAAT TAACTTCAAC GCACATTTCA GTTTACGGAA AAACTGTTTC AATTATCGGA GAAATCGAAA CTGCAAAAAT TGCAAAAGAC GCAATCGAGA TGCTTTTGAG GGGAACTTCG CACTCAAAAA TGTACAAATT TTTAGAAAGA CACAGACAGG ACGTCAAAAG AAGTGAACTT AGACTCTGGA AATAA
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Protein sequence | MYENVEVVKI PKERTGILIG THGEVRKQLE SELGVELEID SEGEVSIYST EDQEDPLALW KARDIVKAIG RGFNPEKALK LVSDEYAFEV IDISEYGNSD KALQRLKGRI IGSGGKSRRY IEELTSTHIS VYGKTVSIIG EIETAKIAKD AIEMLLRGTS HSKMYKFLER HRQDVKRSEL RLWK
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