Gene MmarC6_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_0287 
Symbol 
ID5738936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp261807 
End bp262361 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content36% 
IMG OID641282751 
Productputative RNA-processing protein 
Protein accessionYP_001548340 
Protein GI159904678 
COG category[R] General function prediction only 
COG ID[COG1094] Predicted RNA-binding protein (contains KH domains) 
TIGRFAM ID[TIGR03665] arCOG04150 universal archaeal KH domain protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.522935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGAGA ATGTGGAAGT AGTGAAGATT CCAAAAGAGA GAACAGGTAT CCTTATTGGA 
ACTCACGGAG AAGTTAGAAA ACAGCTTGAA AGTGAGCTTG GAGTTGAATT AGAAATCGAT
TCCGAAGGAG AAGTTAGTAT TTATTCAACA GAAGATCAAG AAGACCCTCT GGCACTCTGG
AAAGCAAGGG ACATTGTAAA AGCTATTGGA AGGGGATTCA ATCCTGAAAA AGCTTTAAAA
CTGGTTTCAG ATGAATATGC ATTCGAAGTA ATTGATATTT CAGAATATGG AAATTCCGAT
AAAGCCCTTC AAAGATTAAA AGGAAGAATT ATTGGAAGTG GCGGAAAATC AAGAAGATAC
ATTGAAGAAT TAACTTCAAC GCACATTTCA GTTTACGGAA AAACTGTTTC AATTATCGGA
GAAATCGAAA CTGCAAAAAT TGCAAAAGAC GCAATCGAGA TGCTTTTGAG GGGAACTTCG
CACTCAAAAA TGTACAAATT TTTAGAAAGA CACAGACAGG ACGTCAAAAG AAGTGAACTT
AGACTCTGGA AATAA
 
Protein sequence
MYENVEVVKI PKERTGILIG THGEVRKQLE SELGVELEID SEGEVSIYST EDQEDPLALW 
KARDIVKAIG RGFNPEKALK LVSDEYAFEV IDISEYGNSD KALQRLKGRI IGSGGKSRRY
IEELTSTHIS VYGKTVSIIG EIETAKIAKD AIEMLLRGTS HSKMYKFLER HRQDVKRSEL
RLWK