Gene MmarC6_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_0217 
Symbol 
ID5738663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp199437 
End bp200114 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content38% 
IMG OID641282681 
Product30S ribosomal protein S3Ae 
Protein accessionYP_001548270 
Protein GI159904608 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1890] Ribosomal protein S3AE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAA TGAAAGCTAG GTCCGCTAAA GGAAAAAGAG TGGCCAAAGA TACATGGAAA 
TCCAAAGTAT GGTACGATAT TTACACACCA CAATCATTCG GTGGAGACGT AATCGGACAA
ACCCCTGCAA ACGACCCTGC AACATTGATC GGTAGGATTT CAGAAATCAG CTTAAGAGAC
TTAACAAACG AACATTCAAA ACACATGACA AGAATGTACT TCAAAGTTGA TGGTGTAAGT
GGAAACAACG CTACATCACA GTTTGTAGGT CACGACACAA CAAGAGAATA CTTAAAATCA
CAAGTTAGAA GAAGAAGAAG CAAAATCAAC GCAATCGTTG ATGTAAGAAC AAAAGATGGT
TTCAAATTAA GAGTTAAAGC ATTAGTTTTA ACAGCTGTAA GAGCAAGAGA CCACCACAAA
ACAGAAATCA GAGTTAAAAT GGAACAAATC ATCAAAGACA TGGCAAAAGA AACAGCATTT
GCTGAATTCG TACATGCTAT GTTAATGGGC GGCTTAGGTT CAAAAATCTA CGGCGACTGT
AAAAAAATGT TCCCATTAAA AAGAGTAGAA ATCTTCAAAT CAGAAGTTTT AGAATTTGGA
AAAGCTGTTG AAGCACCTGT GGAAGAAGCT GCTGCTGAAG AAGTAGCAGA AGCACCTGTT
GCTGAAACAC AAGAATAA
 
Protein sequence
MARMKARSAK GKRVAKDTWK SKVWYDIYTP QSFGGDVIGQ TPANDPATLI GRISEISLRD 
LTNEHSKHMT RMYFKVDGVS GNNATSQFVG HDTTREYLKS QVRRRRSKIN AIVDVRTKDG
FKLRVKALVL TAVRARDHHK TEIRVKMEQI IKDMAKETAF AEFVHAMLMG GLGSKIYGDC
KKMFPLKRVE IFKSEVLEFG KAVEAPVEEA AAEEVAEAPV AETQE