| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0213 |
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| Symbol | |
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| ID | 5738654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 195997 |
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| End bp | 197226 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 641282678 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001548267 |
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| Protein GI | 159904605 |
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| COG category | [N] Cell motility
[R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAT TTGTAGTGGC TACTATGGTC ATCTTATCAA TGTTTTTGCC ATTGCCAGCA
AATGAAAGCT CTAGTTCATA TGCTGAAATG GGGGAGCAAT ATTATCTTGA AAAAAACTAT
GAAAAAGCAG TAGAGTGTTT TGATAAAGAG TTGGAATTAG ATCCAAAAAA TATTTGTTCG
TTAGAATATT TAGGGAAATA TTTCATGAAA AATGAAGATT ATAATAAAGC AGAAATTTAT
TTTACCAGAT TAATTGAAAT AGAACCGAAA AATAAAGATG CTCTGAATAA TTTAGGGCAA
ATATATATGT TAAATGAAGA ATATGAAAAA GCGCTTTATT ACTTCAATAA ATCACTTGAA
ATTGATAGTT CTGTTGGAAA AACGTGGTTT TACAAGGGTG TTTGTTTAAA AATGCTTGAA
AAATATGATG AATCAATTGA AGCGTTTGAT AAATCTACAG GAAACTATGA AGAAATTGTT
TTGATCTGGA ATGAACTGGG ATACATTTAC TATCAAAATG AAAAATACGA TAGTGCAATA
GTATGTTTTG ATAAAGCTTT GGCATTAGAT AGAAATTTGA AATACTCTTT CAACGGCAAA
GGACTTTGCT ATGAGAAAAA AGAACAATAT GATCAGGCAA TAGAGTGTTT TGATAATGCA
ATAGCTCAGG ATAAATTTTA TTATGATGCG ATATACAATA AAGGAATAGT ATGTTACAGC
TTAAAAAACT ATTCTGGTAC AATTTTATGC TTTGAAAAGG CTATTGAACT GAATAATACT
AACGCATACT GTTACTTCTA TAAAGCAGAT TCATTGAAAT GTATGGAGGA ATATGAAAAA
GCAGTTTTAA ACTACGAAAA AGCAGTTGAA CTTGATCCAG AAAATCCCGT TTTTTGGAGC
GGAATTGGAC TTTCATACAA TTATTTGAAA GAATATAATC TTTCAATTCA AGCTTACGAA
AAAGCAGTTC AAATTAATCC AAAAGATGAT GTTTTATGGA GCAATCTTGG ATATCTGCAA
TATAAAAATA AAAATTATAA TGAATCAATT TCTTGCTTTG AAAAAGCTCT TGAATTAAAT
AATAAAAATA AATATGCCTG GAATGGACTA GGGAACTCCT ATTTATTAAT TAAAAATTAT
GAAAAATCGT TAATATGCTA CGAAAAAGCA ATTGAAATAG ATCCATTATA TTCTGAAGCT
AAACTAGGTA AATCATTGAT TTTAGCATAA
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| Protein sequence | MIKFVVATMV ILSMFLPLPA NESSSSYAEM GEQYYLEKNY EKAVECFDKE LELDPKNICS
LEYLGKYFMK NEDYNKAEIY FTRLIEIEPK NKDALNNLGQ IYMLNEEYEK ALYYFNKSLE
IDSSVGKTWF YKGVCLKMLE KYDESIEAFD KSTGNYEEIV LIWNELGYIY YQNEKYDSAI
VCFDKALALD RNLKYSFNGK GLCYEKKEQY DQAIECFDNA IAQDKFYYDA IYNKGIVCYS
LKNYSGTILC FEKAIELNNT NAYCYFYKAD SLKCMEEYEK AVLNYEKAVE LDPENPVFWS
GIGLSYNYLK EYNLSIQAYE KAVQINPKDD VLWSNLGYLQ YKNKNYNESI SCFEKALELN
NKNKYAWNGL GNSYLLIKNY EKSLICYEKA IEIDPLYSEA KLGKSLILA
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