| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0190 |
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| Symbol | |
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| ID | 5737802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 172134 |
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| End bp | 174041 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641282656 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001548245 |
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| Protein GI | 159904583 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
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| TIGRFAM ID | [TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCAGCTG AAGATATATT AAACGAGATA AAGGCGCAGG TTATAAACAA AGCACCTGGA
AATGCGGTTA TTACTGACGT CGAATTTGAA GGTTCAGAAG TAGTTATCTA TGCAAAAAAC
CCAGAACTTT TTTCAAACAA TCTAATCAAA GAATTTGCAA GAGATTTTAG AAAAAGACTT
GCAATTCGAC CGGATCCATC TGTTTTAGTC GAACCTGATA TCGCGAAAGA TAAAATTTTA
AAAATCGTTC CAGAAGATGC TGAAATTACA AACTGTATTT TTGATGCAAA CACTGGTGAA
GTAATAATCG AATCTAAAAA ACCCGGACTT GTAATTGGAA AAGAAGGATC AACCCTTGAA
GATATCAAAA AAGCAATTCA ATGGGCTCCA AAACCAGTTA GAACCCCGCC AATCCCATCA
GATACAATCA AAGCTATTAG AGCTACAATG TATAGGGAAA GAGCAGATGT AAAAGACATT
TTAAGAAGAA TTGGAAGAAG AATCCATAGG GATGTTAGAC TTAGAGATGA CTCTTGGATT
AGAACCTCAT TTTTAGGTGG AAGTAGGGAA GTTGGAAGAA CATGTCTTTA CCACCAGACT
CCTGAAAGCA GAATTTTGGT TGATTGTGGA ATCAACATTG CTGTTGAAGA TGAAAAAGCA
TTCCCACATT TTGATGCACC TGAATTTTCA ATCGAAGAAA TAGATGCAGT AGTAGTAACC
CACGCACACC TTGACCACTG TGGATTTATT CCGGGATTAT TCAGATACGG TTACGATGGA
CCAGTTTACT GTACAAAACC TACAAGAGAT TTGATGACTC TTTTACAAAA AGATTACGTG
GATATTACTG AAAAAGAAGG TAAAAATGTT CCATATTCAT CAAAAGATAT TAAAAACTGT
ATTAAACATA CAATTCCTCT TGATTACGGA GTTACTACAG ACATTGCACC TGCAATTAAA
CTGACACTCC ACAACGCTGG ACACATTTTA GGTTCAGCAA TTGCACACTG CCACGTTGGA
GATGGGCTCT ATAACGTTGC ATACACAGGA GATATTAAAT TTGAAGCATC AAGATTGTTA
GAACCTGCAG TATGCCAGTT CCCAAGACTT GAAACATTAA TTATCGAATC TACTTACGGA
GGATACGACG ATGTACTTCC AGAAAGAGAT GAAACTGAAA AAGAATTCTT AAGAGTAATT
GCTGAAACCA TCGCAAGAAA AGGAAAAGCA ATAATTCCAG TATTTGGTAT CGGAAGAGCT
CAGGAATTGA TGCTAGTTTT AGAAGAAGGA TACAATCAAG GAATTTTCAA CGCTCCAGTA
TATTTGGACG GTATGATCTG GGAAGCAACA GCAATACACA CGGCGTATCC AGAATACCTC
TCTAAAAATA TGAGAAACAG AATTTTCCAT GAAGGAGACA ATCCATTCCT TTCAGAAGTC
TTTAAAAAAG TTAAAAATAC AAATGACAGA AGAAATATTA TCGATAGCGA TGAACCAGGA
ATTATTTTAA CTACATCAGG TATGCTCAGC GGTGGACCGA GTGTTGAATA TTTTAAAAAC
CTCGCTGATG ATGAGAAAAA CGCAATTGTA TTTGTAGGTT ACCAATCCGA AGGAACTTTG
GGTAGAAAAA TCCAAAAAGG ATTTAAAGAA ATCCCATTGA TGGGTAAAAA CGGAAGAAGT
AAGGCTGTTA AAGTAAATCT TTCAGTCCAT ACCTTAGAAG GATTTTCAGG ACACAGTGAC
AGAAAACAGC TCATAAAATA CCTTAGAAAA TTAAAACCAA TCCCAGACCG TATATTAACG
GTTCACGGGG AAGTTTCAAA ATGTATCGAC CTTGCAAGTA CCGCATACAA GTTGTTTAAG
AAAGAAACAA AAGCCCCGAT GAATCTCGAT TCAATAAGAT TGAGATAA
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| Protein sequence | MSAEDILNEI KAQVINKAPG NAVITDVEFE GSEVVIYAKN PELFSNNLIK EFARDFRKRL
AIRPDPSVLV EPDIAKDKIL KIVPEDAEIT NCIFDANTGE VIIESKKPGL VIGKEGSTLE
DIKKAIQWAP KPVRTPPIPS DTIKAIRATM YRERADVKDI LRRIGRRIHR DVRLRDDSWI
RTSFLGGSRE VGRTCLYHQT PESRILVDCG INIAVEDEKA FPHFDAPEFS IEEIDAVVVT
HAHLDHCGFI PGLFRYGYDG PVYCTKPTRD LMTLLQKDYV DITEKEGKNV PYSSKDIKNC
IKHTIPLDYG VTTDIAPAIK LTLHNAGHIL GSAIAHCHVG DGLYNVAYTG DIKFEASRLL
EPAVCQFPRL ETLIIESTYG GYDDVLPERD ETEKEFLRVI AETIARKGKA IIPVFGIGRA
QELMLVLEEG YNQGIFNAPV YLDGMIWEAT AIHTAYPEYL SKNMRNRIFH EGDNPFLSEV
FKKVKNTNDR RNIIDSDEPG IILTTSGMLS GGPSVEYFKN LADDEKNAIV FVGYQSEGTL
GRKIQKGFKE IPLMGKNGRS KAVKVNLSVH TLEGFSGHSD RKQLIKYLRK LKPIPDRILT
VHGEVSKCID LASTAYKLFK KETKAPMNLD SIRLR
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