Gene MmarC6_0176 details

Gene Information

• Locus tag: MmarC6_0176
• ID: 5737797
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: -
• Start bp: 156270
• End bp: 156980
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 641282642
• Product: hypothetical protein
• Protein accession: YP_001548231
• Protein GI: 159904569
• COG category: [S] Function unknown
• COG ID: [COG1891] Uncharacterized protein conserved in archaea

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 0.504348
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATATTAC TTGTAAGTCC TAAAGATGTT GCTGAAGCCT ACGAAGCAAT CGAGGGCGGT 
GCTGACATAA TTGATGTCAA AAATCCTCCT GAAGGTTCAT TGGGTGCAAA CTTTCCATGG 
GTAATTAAAG AAACAAGAGA AGCAACACCG GAAGGAATGC TTGTAAGTGC TGCAATTGGT 
GATGTTCCAT ATAAACCAGG GACAGTTACG CTCGCAGCTT TAGGGGCAAC AGTGAGTGGT 
GCTGATTACA TAAAGGTCGG ACTTTACGGT ACAAGATCAT ACCAAGAAGC ATTGGATGTA 
ATGAAAAATG TTACAAAAGC AGTAAAAGCT GTTGGGGAAA ACAAAATCGT TGTAGCTGCA 
GGATACGCTG ACGCTTACAG AGTTGGTGGA GTTGATCCAC TGGTTATTCC AAGAGTTGCA 
AGAGATGCAG GATGCGACGT TGCAATGCTT GACACTGCTG TAAAAGATGG AAAAACATTA 
TTTGACCACA TGAGCATTGA ATTATTAAAA GAATTTGTTG AAGAAACACA CAAATACGGA 
ATGAAATGTG CTCTTGCAGG TTCAATTAAA ATTGAAGAAA TTCCAATGTT AAAAGAAATT 
AATTGTGATA TCGTTGGTGT AAGGGGCGCT GCATGCACCA AGGGTGACAG AAACGAAGGA 
AGAATTCAAA AAGATTTAGT TAAAGAAATT GTAAAAGTAT GCAAAGAATA A 

 

Protein sequence

MILLVSPKDV AEAYEAIEGG ADIIDVKNPP EGSLGANFPW VIKETREATP EGMLVSAAIG 
DVPYKPGTVT LAALGATVSG ADYIKVGLYG TRSYQEALDV MKNVTKAVKA VGENKIVVAA 
GYADAYRVGG VDPLVIPRVA RDAGCDVAML DTAVKDGKTL FDHMSIELLK EFVEETHKYG 
MKCALAGSIK IEEIPMLKEI NCDIVGVRGA ACTKGDRNEG RIQKDLVKEI VKVCKE