| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0171 |
|---|
| Symbol | |
|---|
| ID | 5737819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 148193 |
|---|
| End bp | 149929 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641282636 |
|---|
| Product | indolepyruvate ferredoxin oxidoreductase, alpha subunit |
|---|
| Protein accession | YP_001548226 |
|---|
| Protein GI | 159904564 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
|---|
| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAATGCTTGG AAACGAGGCA GTGGCGAGAG GCGCTTACGA AGCAGGAGTT
CTTGTAGCAA CAGCGTATCC TGGAACTCCG AGTACTGAGA TTACCGAATA TATTTCAAAA
TATTCTGAAA TTAATTCAGA ATGGTCTGTA AATGAAAAAG TTGCTCTTGA AGTGGGTATC
GGTTCAGCAA TTGCAGGCGC TAGGACCATA GTTTCAATGA AACACGTGGG ATTAAACGTT
GCAGCAGATC CACTAATGAC TGTCGCATAC ACGGGAATTA ATGCAGGACT TTTGATAGTT
GTTGCAGATG ATCCAAGCAT GCACAGTTCC CAAAACGAGC AAGATACAAG ATACTATGGG
ATGTTTGCAA AAATACCTGT ATTGGAACCT TCAGACAGTC AGGAATGTAA GGACTTTGTA
AAATTGGGTT TTGAAATCAG TGAAAAATTT GATACTCCAG TAATATTGAG ACTCAGCACG
AGAGTATCAC ACTCACAAAG CCTAGTTGAA TTGGGCGAAA AAGAATCAAT TGAATTAAAG
CCATATGATA AAAATCCTTC GAAATATATT TCAGCACCTG CAAATGCGAA GAAAAGAAGA
ATTTTCATCG AAGAAAGATT AAAAGAACTT TCTGTTTTCG CAGATTCATC GGACTTAAAC
AAAATTGAAT ACGGGAATAA AAAAATTGGA ATTGTTACAA GCGGAGTTGC ATACAATTAC
GCAAAAGAAG TTGTTCCTGA TGCATCTTTT TTAAAATTTG GAATGAGTTA CCCGCTTCCA
GAAGAGAAAA TAAACGAATT CATTCAAAAT TGCGACAAAG TTTATGTTTT TGAGGAATTG
GAACCTATTT TTGAGCAAAA AATTAAATCA ATGGGTTTAA ATGTAATTGG AAAAGAAATA
TTCCCAATTA TTGGGGAATT AAGCAGCGAA ATAATTAGAA GTGCGCTTTT AAACGAATCA
AAAGAAGTTA TTGATAAATT TGACGAGTTA CCTCAAAGGC CACCAGTTTT GTGTCCTGGA
TGTCACCACA GGGGCCCATT TTACGTTCTT AAAAAATTAA AACTTCACGT TGCAGGAGAT
ATTGGCTGCT ACACCCTCGG AGGATTTGAG CCATTAAATG CAATTGATAC TACAATCTGC
ATGGGTGCAA GTATCGGAAT GGCACACGGA TTTGAAAAAG CGAGGGGAAA AGACTTTGCT
AAAAAATCTG TTGCGGTTAT CGGAGACTCT ACATTTTGGC ATTCAGGAGT TACTGGTTTA
ATTGATATTG TATACAACAA AGGACACAGC AACGTGATAA TTTTAGATAA TTCAATAACT
GCAATGACCG GACACCAAGA AAACCCTTCA ACTGGAAAAA CACTCTCTGG GGAAAGTGTT
CCTGCAATAG ATTTTGAAGC ACTCGGAAAG TCTATTGGAA TAAACAGAAT TCGAGTAGTT
GACGCGTACG ATTTAAAAGC ACTTGAAGAA ACGATAAAAG AAGAAGTAAA TGCAGAAGAA
CCTTCTTTGA TTATTACAAA AAGACCATGT GTATTGATAA AAGGTGCCAA ATTTGATTTT
AAAGATTATA GAATAGATCC TGAACTTTGC ACTGGCTGCA AACTATGTTT AAAAATAGGA
TGTCCAGCAA TTTCATTTGA CGGAAAAGTT GCAAAGATAA ATGATTCATT ATGTGTTGGA
TGCGGGCTTT GTAAAGACTT ATGTAAATTT TCAGCAATAG TTGAGGTGGT AAAATAA
|
|---|
| Protein sequence | MKKLMLGNEA VARGAYEAGV LVATAYPGTP STEITEYISK YSEINSEWSV NEKVALEVGI
GSAIAGARTI VSMKHVGLNV AADPLMTVAY TGINAGLLIV VADDPSMHSS QNEQDTRYYG
MFAKIPVLEP SDSQECKDFV KLGFEISEKF DTPVILRLST RVSHSQSLVE LGEKESIELK
PYDKNPSKYI SAPANAKKRR IFIEERLKEL SVFADSSDLN KIEYGNKKIG IVTSGVAYNY
AKEVVPDASF LKFGMSYPLP EEKINEFIQN CDKVYVFEEL EPIFEQKIKS MGLNVIGKEI
FPIIGELSSE IIRSALLNES KEVIDKFDEL PQRPPVLCPG CHHRGPFYVL KKLKLHVAGD
IGCYTLGGFE PLNAIDTTIC MGASIGMAHG FEKARGKDFA KKSVAVIGDS TFWHSGVTGL
IDIVYNKGHS NVIILDNSIT AMTGHQENPS TGKTLSGESV PAIDFEALGK SIGINRIRVV
DAYDLKALEE TIKEEVNAEE PSLIITKRPC VLIKGAKFDF KDYRIDPELC TGCKLCLKIG
CPAISFDGKV AKINDSLCVG CGLCKDLCKF SAIVEVVK
|
|---|
| |