Gene MmarC6_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_0137 
Symbol 
ID5738463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp108021 
End bp110219 
Gene Length2199 bp 
Protein Length732 aa 
Translation table11 
GC content34% 
IMG OID641282602 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001548192 
Protein GI159904530 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT TAAATACCAA GAAATTGGGT ACTAAAATGC TTATATTCTC CATTATAAGC 
GTTTTGATAC CCCTACTTGC ATTTGGTTTC GTTGCAAACG ATACTATTGC AAGTATTTTA
GATGACAATG CTCAAAAAAG CATTAATACA GATATAAAAA TTGCAGAACA AATTATAGAC
TCAAGATTTA CGGAATTTGA ATCAATTTGC GAATATGCAT CAAATAAAGC TGATGTTATA
ACGGCAATAT CAAATAAAGA TTCTGAAAAA TTAAGCATAG GTGTTGAAAC ATTTAGGGTT
GCAATTGATG CTGATTTTGC AGGTGTTTTA GATGCAAATG GAAATACGAT TGCATCTACC
GCAGGATCTG ATATTCAAAT TGGAAGTGTG GCACAAAAAA TGATAACTTC AGGAACTAAA
AGTTCTTTTG AATCAATTCC TTCAAGTTCA GCATACAAAA TAAACAAAAA TTACAAAGTT
GAAAATGTAG AAAATGCGCT TGGAATGGTT GTTACATACC CAGTTTATGA AAATGGAAAA
ATCGTGGGTT CAATTATAAT AATTGATATT TTAAACAATA ACAATAAAAT GGTAGATAAC
GTAAAGGCAG ATACTGGCGA TGAAGCTACA TTTTCGCTTG GAAAACAGAG AATTACTACA
AGTTTAATTG ACAATGGAAA AAGGCCCGTT GGAACTTCAA TTTCAGATGA AGTCTGGAAT
TATGTAAGAT CCCAAAATTC AATATATAAG GGAACTGCAA ATGTTTTAGG AACTGAGTTT
ATTACTGCTT ATGAACCACT TCTAGATGCA AATAACAATG TAATTGGAAT GGTATTTGTT
GGGGCTCCGC AAACTGATGC AATTGCTGCT AAAAACGATG CACGGAACAA AATTATAATG
CTTGCATTAT TTGGTATTTT GGTTGCATTT TTAATTTCAA CATATTCAAA CAGAAAAATT
ACAAAACCAA TTGAAGAACT CAAAAAAGGA ACTAATGAGT TTGGAAGTGG AAATTACGAT
CATAAAACCA AAGTAAAAAC TGGTGACGAA TTAGAAGAAC TTTCTGAATC ATTCAACGGA
ATGGCCGAAA ATGTTAAAAA TTTAATGAAA ACAATGGATA TGGATAAGGT TGAACTTGCA
AATCTTCTTA ATAATGTAAC AAATGTAATG AATAATGTTG CAAAAGGAGA CTTTACCGCA
AGAGCTGATG AAAATACTGA AAATAACACC CTTCAAAAAG CAATCAACAC TGCGGTTGCA
AATGTTGCAC AGTTAATTAA AGATTTGCGA GAAGAAGTTG ATTTACTAAA TATTCAAGTT
CAAAAAGTTG AAGATGAACT TAAAGGTGCT GAGGAAACTG CAACTCAGGT AACAGAAGCT
GCAACACAAG TTGCGGAAGC GTCAAGCGAC CAATCTTCAA AATTACAGGA AGCATCAGAC
CAACTTGAAA ATACATACGG CGTTGCAAAA GAAGTTTATA GTGCTGCAGA AGAAACTGTT
AAGGCTGCAG AAGAAATCGG AGAAAACTCT GAAAATGGAG TTAAAAAAGT TGAAAATGCA
ATTTCAAGAA TGCAATCAAT AACAAACGTA ATTGAAGACC TGGGAAAAGC AATCCATATG
CTTGGCGATG ATGGTAAAAA GATCAACGAT GTTACCGGAT TAATCAAAGA TATTGCAGAA
CAGACTGGAC TTTTAGCATT AAATGCTTCT ATTGAGGCTG CCCGGGCTGG AGATGCGGGA
AAAGGATTTG CAGTTGTTGC AAGCGAAATT AAGGCGTTAG CAGAAGAAAT TAAAAAATCC
GTCGAAGATA TTAACCATAC GATTGACGGA GTAAATAAAA GAATTGAAGA TACGATAGAT
TTAGGATTAA AAGGAAAAGA TGAAGTCGAT AAAGGAGTAA TTGCAATTGA TGAAGTAAAT
GATGCACTTT TAAGGATAAA AGAAAGTGTA AATGGTGCTG CAATTAAAAT AAACGGAATT
AAAAAAGGTG CACAAAGTGC TGCAGACAAT ACCGAAGGCG CTTTGAAAAA TGCACAGGAC
ATTGCTGCAC TCTCAGAAGA GTTTACTGCA ACAGCAGAAG AGGTCACTGC ATCAACTGAA
GAATTGAATT CAATCATTGA AGAAATTCGG GGTGTTGCAG AAGAAGTAAC CCATGTCGCA
GAACGAGTAA CTAAAAAATC AAGTCAGTTT AAAATTTAA
 
Protein sequence
MKILNTKKLG TKMLIFSIIS VLIPLLAFGF VANDTIASIL DDNAQKSINT DIKIAEQIID 
SRFTEFESIC EYASNKADVI TAISNKDSEK LSIGVETFRV AIDADFAGVL DANGNTIAST
AGSDIQIGSV AQKMITSGTK SSFESIPSSS AYKINKNYKV ENVENALGMV VTYPVYENGK
IVGSIIIIDI LNNNNKMVDN VKADTGDEAT FSLGKQRITT SLIDNGKRPV GTSISDEVWN
YVRSQNSIYK GTANVLGTEF ITAYEPLLDA NNNVIGMVFV GAPQTDAIAA KNDARNKIIM
LALFGILVAF LISTYSNRKI TKPIEELKKG TNEFGSGNYD HKTKVKTGDE LEELSESFNG
MAENVKNLMK TMDMDKVELA NLLNNVTNVM NNVAKGDFTA RADENTENNT LQKAINTAVA
NVAQLIKDLR EEVDLLNIQV QKVEDELKGA EETATQVTEA ATQVAEASSD QSSKLQEASD
QLENTYGVAK EVYSAAEETV KAAEEIGENS ENGVKKVENA ISRMQSITNV IEDLGKAIHM
LGDDGKKIND VTGLIKDIAE QTGLLALNAS IEAARAGDAG KGFAVVASEI KALAEEIKKS
VEDINHTIDG VNKRIEDTID LGLKGKDEVD KGVIAIDEVN DALLRIKESV NGAAIKINGI
KKGAQSAADN TEGALKNAQD IAALSEEFTA TAEEVTASTE ELNSIIEEIR GVAEEVTHVA
ERVTKKSSQF KI