| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0135 |
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| Symbol | |
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| ID | 5738482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 106274 |
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| End bp | 107242 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641282600 |
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| Product | integrase family protein |
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| Protein accession | YP_001548190 |
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| Protein GI | 159904528 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0689406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAC TAGAAAACAT GCTCGTAATT ACTACGAAGA GAGAACCAGT AAAAGAAACC
CCCAAGATGA ACAGCTGGGT TTCAAAATTT GTCGAAGAGC GAGAATTTGA CGGGATAAAA
CCAAGAACCA TTGAAAACGA TGTCTCAAGA CTCAAAATAT ACTTAGATTT TATTAATGAA
AGACTCCAAA AAGATGCAGA TTCTGTGGAA AATCACGATT TCATAAAATT CTTTAATTAT
TTAGATAAAG AAAGAAGGCT TTCAAAAAAT ACTCAAAATC GATATTTCAA TCTTTTAAAG
GTTTTCTATA AGATTATGAA ACTTAATAAT TTCAAAGATT TTGAAGAGGA AAGTCTTGAT
AGGAAAAGAT TTTCCAGATT TGAAGTAAAA CACTACGATG CAATTGATTT GGATACGCTA
AATCTAATAT TAACAGGCGT TGTGAAAAGT ACTGGAAGAT CTAAAGTGCG AGACGGGATT
ATCATACGGC TACTCTGGGA TACTGGATGC AGACTTTCTG AAATATTGAA TTTAAGATAC
AAAGACTGCG ATTTTGAAGA AGGATCGTTT AAATTAAGAA ATACTAAAGG AAAAGTCGAA
AGAGTTGTTG TATGCACTAA TGAAACATTA AACATTTTAA CACAATACAT AAAACATAAT
GTTTATCAGG GCCACGAAGA TCGGATCTTT CAAAGCACCA CTGGTGGAAA GGTAGAAAGA
AGCCATATGA GTAAAGTCTT CGCAAAACAG ATTAAAAAGT TACAGGATCA AGGATTGATT
TCTCCAAATA GAAGGCTTGT TATCCATTCT TTAAGACATG GAAGAGCGGT AGATCTTTTG
GAAAAGGGAA TGCCTATCGA TATTGTAAAA GAATATCTTG GACATGCTTC TCTTGAAACA
ACTTTATTTT ATGCGCATTC ACGGGAAAGA AAAGATAAGA TGCTAAAAGA CATTAAAAAA
ATATTATAA
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| Protein sequence | MKELENMLVI TTKREPVKET PKMNSWVSKF VEEREFDGIK PRTIENDVSR LKIYLDFINE
RLQKDADSVE NHDFIKFFNY LDKERRLSKN TQNRYFNLLK VFYKIMKLNN FKDFEEESLD
RKRFSRFEVK HYDAIDLDTL NLILTGVVKS TGRSKVRDGI IIRLLWDTGC RLSEILNLRY
KDCDFEEGSF KLRNTKGKVE RVVVCTNETL NILTQYIKHN VYQGHEDRIF QSTTGGKVER
SHMSKVFAKQ IKKLQDQGLI SPNRRLVIHS LRHGRAVDLL EKGMPIDIVK EYLGHASLET
TLFYAHSRER KDKMLKDIKK IL
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