Gene MmarC6_0056 details

Gene Information

• Locus tag: MmarC6_0056
• ID: 5738261
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 48858
• End bp: 49403
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641282524
• Product: hypothetical protein
• Protein accession: YP_001548114
• Protein GI: 159904452

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.000388029
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACCGCA AATTAACAAT CAATGGTGAT GTTGATACAC TGATCCAGGG GGAAGTTATC 
ACCGTAAATC TTAACCGACC CAAAAAAGAA AAAAGATTTT TTAGAACCGA TTCACAACTT 
GAAAGGCTTA AACAAAGGGC TGCAAGAAAA TCTTCTAGTT TTAAAGAGTT TGCACTCGAA 
CAGATGTTTC CTGAAGAACA CTTCAAAATA AGTAAAATCG ATAATAAGTA CAAAAATGAA 
CCTGACTTTT TGATAAAACA CAAAAGGAAA GGTAAAGAAT TTTACGTTAA GTGTAAATTT 
AGAGGATATC TCTTTAAAGG GCACTACGAC TGGATACGAA AGGACCAGCT GGAATGTTTT 
AAGAATTATT CGCATGAAAA TAAAAAACCT GTTTACTTCG CACTTGGTCT TTCGGGATGC 
GCAAAAGATC CAGATCATGT CTACATCATG CCACTTGAAA ATGCCGATTG CAGGCTGAAA 
CTCGTGCAGA TGGTTGACTG GAAGATATCT GATGAAACAG ATATTTACAG AATTTTAAAG 
ATTTAA 

 

Protein sequence

MYRKLTINGD VDTLIQGEVI TVNLNRPKKE KRFFRTDSQL ERLKQRAARK SSSFKEFALE 
QMFPEEHFKI SKIDNKYKNE PDFLIKHKRK GKEFYVKCKF RGYLFKGHYD WIRKDQLECF 
KNYSHENKKP VYFALGLSGC AKDPDHVYIM PLENADCRLK LVQMVDWKIS DETDIYRILK 
I