| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0054 |
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| Symbol | |
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| ID | 5738204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 46103 |
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| End bp | 46783 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641282522 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001548112 |
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| Protein GI | 159904450 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00302392 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAAA AGTTTTTAAA ATCACATCTT AATCTCTCTG GAAAAATTGA AGGGCTGCAA
AGAAAAGACG CTTATGAAAT CCCATTTATT GCATTAAGGG AGGCGTTGAT AAACGCAGTA
GTTCACAGAG ATTATTCAAT TTTGGGATCA GACATTAAAG TTTCAATTTC TGACAGCCTT
TTAGAGATAA CTTCTCCAGG CTCCCTTCCA AGTACAATAA GTGTTGATGA CCTTGGAACA
GGATGTTCTG AAGTGAGAAA TCCCATAATT GCAAGAATAT TTAAAGAAAC AAAATTTATT
GAGCAGTGGG GGTCAGGATT TAGAAAAATA TTTAATGAAT GTGAAAAATA CGGGCTTAAA
AAGCCGGAAA TTATTGAAAC CTCATTTTTA AAAGTTAGAT TTTATCGACC GCTTGTTGGT
GACCGGTCGA TAACGGGCGA TACTACATCT GACCGGTCGA TAACGGGCGA TACTACAACT
CAGTATTTGG ATGTCCAATA TGCAGCAATA ATAAAACATG TTACTGAAAA TGGACAAATA
TCTTCAAAAG AAGTTGAATC AGTATTAAAA CTTAAGAAAA CAAGAGTCCA AGAGATTTTA
AAAGAAATGG TCGAAAAAAA TATCCTTGAA AAGAAAGGTA AAGCAAGAGC GACCCGATAT
ATTTTAAAAA GAATTAATTA A
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| Protein sequence | MAEKFLKSHL NLSGKIEGLQ RKDAYEIPFI ALREALINAV VHRDYSILGS DIKVSISDSL
LEITSPGSLP STISVDDLGT GCSEVRNPII ARIFKETKFI EQWGSGFRKI FNECEKYGLK
KPEIIETSFL KVRFYRPLVG DRSITGDTTS DRSITGDTTT QYLDVQYAAI IKHVTENGQI
SSKEVESVLK LKKTRVQEIL KEMVEKNILE KKGKARATRY ILKRIN
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