| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0036 |
|---|
| Symbol | |
|---|
| ID | 5737981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 29983 |
|---|
| End bp | 30957 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641282504 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001548094 |
|---|
| Protein GI | 159904432 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.95657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC TGGAGAAAAA GTTACTTTAT GGAACAAAAC CTGATCCTGT AGTGGCTACT
GAAGAACAAA ACAAGTATAT AATGAAATTC CGCGAAGAAC GAGAATTCGA TAATATCAAA
CCATCAACCA TAAAAAACGA CATTACGTCT TTAAAAGTAT TTTTAGCATT TTGTGAAGAA
ATTGAGAAAG AACCGTATTC TTTAACTACC CATGACTTTG TAATATTCTT TAATATGCTA
AATAATCGTA GGAACTGTAC AGTAAGAACT CAAAATAGGT ATTTTAACCT TTTAAAAGTA
TTTTACCGGC TTTTAAAATA TGATAATTTT AAAGAATTCG AACGAGAAAG CATTGAAAGA
AAAAGGTTTT CAAAATTCGA GAAAAAACAC TATGATACAA TTAATTTTGA TACCTACAAC
AGGATAATCA AAGAGATAAT CCTAAGCAAC AGCAGGACAA GGCTTAGAGA TGCGCTTATC
GTGAGAGTAC TTTGGGAAAC CGGTTGTAGG CGATCTGAAG CACTAAATAT TAGATACAAA
GATTGTGATT TTGAAAAGGG TCGATTTAGA ATAAGAGATA CAAAAACCTA CGAAGAAAGA
ACGGTCGTTA TTGCACAGGA AACTGTTGAA ATTCTGAGAG ATTACATAAA AGAAAACATC
AGAAGAGATT CAAATGACTA CATCTTCCAA AATGAAATGA TACAAAACGG TAAACGGGTA
AAACTCGACT GGATTACAAA TGTGTTTAAA AAAGCAGTTC GAAAATTAAA AGAAGAAGGC
GTAATTCAAG AAGGTAAACG AATTGTTATT CATAGCTTAC GACATGGAAG AGCAACTGAT
CTTTTAGACA AAGGGGTTCC AATTGACGTA GTAAAAGAGA TCTTGGGTCA CCGATCACTT
GAAACAACCC TTTATTATTC ACATTCGAAG GAAAGAAAAG ACGGAATGCT TGATAACATT
CAAAAATTAC TTTAA
|
|---|
| Protein sequence | MNELEKKLLY GTKPDPVVAT EEQNKYIMKF REEREFDNIK PSTIKNDITS LKVFLAFCEE
IEKEPYSLTT HDFVIFFNML NNRRNCTVRT QNRYFNLLKV FYRLLKYDNF KEFERESIER
KRFSKFEKKH YDTINFDTYN RIIKEIILSN SRTRLRDALI VRVLWETGCR RSEALNIRYK
DCDFEKGRFR IRDTKTYEER TVVIAQETVE ILRDYIKENI RRDSNDYIFQ NEMIQNGKRV
KLDWITNVFK KAVRKLKEEG VIQEGKRIVI HSLRHGRATD LLDKGVPIDV VKEILGHRSL
ETTLYYSHSK ERKDGMLDNI QKLL
|
|---|
| |