Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0002 |
Symbol | |
ID | 5737930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 1153 |
End bp | 3099 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641282470 |
Product | hypothetical protein |
Protein accession | YP_001548060 |
Protein GI | 159904398 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0396837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATAAAAC GTTATATTCT TTTTTTACTA TTTTTGTTAG GTGTTTTGGG TTCTGTTAAT GCCGTGTATA TTACATTTCC AGAAACATGT GCTCCTTCAA ATTGGTACGT AGTATTAAAC AATAATACTC TAACTACTGA ATTAGTAGAA TTACAATTAA ATACTACTGA TTGGGGTTAT TCTGCCCCGA ATATAGTAGG AATTGATAAT AATATTATTT ATTTCTCATC TAAACAAGAA ATGGCTCGAT TTTGTTCGAT TGTTTCTTAT TCTTCGCCAA CTATGGTTTT AGCTGGAGCG TTTGTTCCGT ATGAGAACGG TCAAATGTTA CCTATGACAG TTATTACGAC ATATGGTTCG TTTTATTCAA TAAATTCTCG TCAAATTGGT GCATATTTGG ATACTGTGGC CGATACTTCG CAAATTGCAT ATGTATATGC CCATTCTGCA AATGGGGATT ATTCTCAAAC GTGGGTTCTG AATAATGGTG TTGAGGTTTA TTATTGTGGA TATGAAGCAT CCAATCCTCA ATTTTTTGCA ACAACCCTTC TTTCATCTAA TCGATTTGAA CATGATTATA GGGGTGGGGG TTATTCTTCA AGATCTTCTC GATTAAGAAC TTCATTGGTG GTTTTTGATT ATGTTGAATG GAATAGTACC CCTGTCGTTG TAACTGAAAC TGTAGAGGAG TTATACTCAC CCCCAATAAG AGGAAATATT TCAATATATT CGGATGCAAA TACTGAAATT TATGAAGGAG TTGGATTAAT AGGTACAACG GATAATGGTG GACTTTTAGA CGTTCAGCTT CCAGTTGGAG AGCATACTTT AAAATTCGTC AAAGATGGTT ACTGGGATGT ATATGAAACA ATAACTGTAA CTGCTGAAAA CAACAGTGAA ATTTATGTTT CGATGGCTCC GAAAAATGCA ATTTTTCAAG TTTCAGAAGA ATTTTCTGGA AATATCTATC CAAATTCGAT TTCAACACTT TCAATGGATA TAACTCCGAT TAAAAACGCA TATGCTACAA AATTAAGAAT ATCGGGGGTT GAGGTAAACA AAGTTTATTA TCAAACTCAT GAAATTCCAA AAGCAGCTGA TGGATCTTAC ATCTTAGGGG ATGTAACAAG TACTCAAAAT ATCGAAATCG AGTTTAAAAC ACCTTCGTCT TGGGGTGAAA AAGCGTTTAC TGTAGAAATA TCTGCAACAG ATATCGAAGG AACAGCTTAC ACTAACCTTG AAACTATCAA TTATGAAGTT TTGGAACTTC CATTTTTACT CGAAATGCCT GAAACTTTTG GAATCGGAAT AAATGATATT ACATTAACAG ACCAGTCTGG GACTGCTTAT TCAGTTTTAA TGGTCCTTTA TAATTCTGAA GGAACTGAAA CATGGAGTTC AAGCACCAAT CTTTTAGAAT ACTGCGGTTA CACGTTTGAA GTTCCAGTTG AAGATGCAGG AGATTACACG CTTGAATTAA ATGCAAAAGC AGGAGCAGTA AAAACATATT ATTCAATTGA TATCATTGAA CCAGTAACTT TGATTACTGA TGAAATCACG GTAAATCCAG GGAATGTCGC AACAGTACAG TTTAAGATTT CAAATCCTAC TTCAAATGTA AAATATTACA CTGCAAATTT AACAGGCCCA TTCTTTAATG AATCAGTTGT TAAAACGTTT TCAATAGCCC CTGGAACTGT TGATAAAACA GTTGACATGT CGTTTGAAGT TCCTGAAGGG TTAGAACTTG AAAACTACCA GTTAGTCTTA AAAATATTTG ATCCAGATAA AACAGAGCCA ATATATTCTG GAAATATTGT TTTGACTATT TCAGAAAGTT CACTTTTCCT AGCTTCAGTT CCAGGGGGTA ACACCACACT AATTCTTTTA GCTGCTGCAG TTCTTTTAAT TGCAGGAACG TTTGCAGCAT TGAGGCTGAA AAAATGA
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Protein sequence | MIKRYILFLL FLLGVLGSVN AVYITFPETC APSNWYVVLN NNTLTTELVE LQLNTTDWGY SAPNIVGIDN NIIYFSSKQE MARFCSIVSY SSPTMVLAGA FVPYENGQML PMTVITTYGS FYSINSRQIG AYLDTVADTS QIAYVYAHSA NGDYSQTWVL NNGVEVYYCG YEASNPQFFA TTLLSSNRFE HDYRGGGYSS RSSRLRTSLV VFDYVEWNST PVVVTETVEE LYSPPIRGNI SIYSDANTEI YEGVGLIGTT DNGGLLDVQL PVGEHTLKFV KDGYWDVYET ITVTAENNSE IYVSMAPKNA IFQVSEEFSG NIYPNSISTL SMDITPIKNA YATKLRISGV EVNKVYYQTH EIPKAADGSY ILGDVTSTQN IEIEFKTPSS WGEKAFTVEI SATDIEGTAY TNLETINYEV LELPFLLEMP ETFGIGINDI TLTDQSGTAY SVLMVLYNSE GTETWSSSTN LLEYCGYTFE VPVEDAGDYT LELNAKAGAV KTYYSIDIIE PVTLITDEIT VNPGNVATVQ FKISNPTSNV KYYTANLTGP FFNESVVKTF SIAPGTVDKT VDMSFEVPEG LELENYQLVL KIFDPDKTEP IYSGNIVLTI SESSLFLASV PGGNTTLILL AAAVLLIAGT FAALRLKK
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