Gene MmarC6_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_0002 
Symbol 
ID5737930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1153 
End bp3099 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content34% 
IMG OID641282470 
Producthypothetical protein 
Protein accessionYP_001548060 
Protein GI159904398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0396837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAAAAC GTTATATTCT TTTTTTACTA TTTTTGTTAG GTGTTTTGGG TTCTGTTAAT 
GCCGTGTATA TTACATTTCC AGAAACATGT GCTCCTTCAA ATTGGTACGT AGTATTAAAC
AATAATACTC TAACTACTGA ATTAGTAGAA TTACAATTAA ATACTACTGA TTGGGGTTAT
TCTGCCCCGA ATATAGTAGG AATTGATAAT AATATTATTT ATTTCTCATC TAAACAAGAA
ATGGCTCGAT TTTGTTCGAT TGTTTCTTAT TCTTCGCCAA CTATGGTTTT AGCTGGAGCG
TTTGTTCCGT ATGAGAACGG TCAAATGTTA CCTATGACAG TTATTACGAC ATATGGTTCG
TTTTATTCAA TAAATTCTCG TCAAATTGGT GCATATTTGG ATACTGTGGC CGATACTTCG
CAAATTGCAT ATGTATATGC CCATTCTGCA AATGGGGATT ATTCTCAAAC GTGGGTTCTG
AATAATGGTG TTGAGGTTTA TTATTGTGGA TATGAAGCAT CCAATCCTCA ATTTTTTGCA
ACAACCCTTC TTTCATCTAA TCGATTTGAA CATGATTATA GGGGTGGGGG TTATTCTTCA
AGATCTTCTC GATTAAGAAC TTCATTGGTG GTTTTTGATT ATGTTGAATG GAATAGTACC
CCTGTCGTTG TAACTGAAAC TGTAGAGGAG TTATACTCAC CCCCAATAAG AGGAAATATT
TCAATATATT CGGATGCAAA TACTGAAATT TATGAAGGAG TTGGATTAAT AGGTACAACG
GATAATGGTG GACTTTTAGA CGTTCAGCTT CCAGTTGGAG AGCATACTTT AAAATTCGTC
AAAGATGGTT ACTGGGATGT ATATGAAACA ATAACTGTAA CTGCTGAAAA CAACAGTGAA
ATTTATGTTT CGATGGCTCC GAAAAATGCA ATTTTTCAAG TTTCAGAAGA ATTTTCTGGA
AATATCTATC CAAATTCGAT TTCAACACTT TCAATGGATA TAACTCCGAT TAAAAACGCA
TATGCTACAA AATTAAGAAT ATCGGGGGTT GAGGTAAACA AAGTTTATTA TCAAACTCAT
GAAATTCCAA AAGCAGCTGA TGGATCTTAC ATCTTAGGGG ATGTAACAAG TACTCAAAAT
ATCGAAATCG AGTTTAAAAC ACCTTCGTCT TGGGGTGAAA AAGCGTTTAC TGTAGAAATA
TCTGCAACAG ATATCGAAGG AACAGCTTAC ACTAACCTTG AAACTATCAA TTATGAAGTT
TTGGAACTTC CATTTTTACT CGAAATGCCT GAAACTTTTG GAATCGGAAT AAATGATATT
ACATTAACAG ACCAGTCTGG GACTGCTTAT TCAGTTTTAA TGGTCCTTTA TAATTCTGAA
GGAACTGAAA CATGGAGTTC AAGCACCAAT CTTTTAGAAT ACTGCGGTTA CACGTTTGAA
GTTCCAGTTG AAGATGCAGG AGATTACACG CTTGAATTAA ATGCAAAAGC AGGAGCAGTA
AAAACATATT ATTCAATTGA TATCATTGAA CCAGTAACTT TGATTACTGA TGAAATCACG
GTAAATCCAG GGAATGTCGC AACAGTACAG TTTAAGATTT CAAATCCTAC TTCAAATGTA
AAATATTACA CTGCAAATTT AACAGGCCCA TTCTTTAATG AATCAGTTGT TAAAACGTTT
TCAATAGCCC CTGGAACTGT TGATAAAACA GTTGACATGT CGTTTGAAGT TCCTGAAGGG
TTAGAACTTG AAAACTACCA GTTAGTCTTA AAAATATTTG ATCCAGATAA AACAGAGCCA
ATATATTCTG GAAATATTGT TTTGACTATT TCAGAAAGTT CACTTTTCCT AGCTTCAGTT
CCAGGGGGTA ACACCACACT AATTCTTTTA GCTGCTGCAG TTCTTTTAAT TGCAGGAACG
TTTGCAGCAT TGAGGCTGAA AAAATGA
 
Protein sequence
MIKRYILFLL FLLGVLGSVN AVYITFPETC APSNWYVVLN NNTLTTELVE LQLNTTDWGY 
SAPNIVGIDN NIIYFSSKQE MARFCSIVSY SSPTMVLAGA FVPYENGQML PMTVITTYGS
FYSINSRQIG AYLDTVADTS QIAYVYAHSA NGDYSQTWVL NNGVEVYYCG YEASNPQFFA
TTLLSSNRFE HDYRGGGYSS RSSRLRTSLV VFDYVEWNST PVVVTETVEE LYSPPIRGNI
SIYSDANTEI YEGVGLIGTT DNGGLLDVQL PVGEHTLKFV KDGYWDVYET ITVTAENNSE
IYVSMAPKNA IFQVSEEFSG NIYPNSISTL SMDITPIKNA YATKLRISGV EVNKVYYQTH
EIPKAADGSY ILGDVTSTQN IEIEFKTPSS WGEKAFTVEI SATDIEGTAY TNLETINYEV
LELPFLLEMP ETFGIGINDI TLTDQSGTAY SVLMVLYNSE GTETWSSSTN LLEYCGYTFE
VPVEDAGDYT LELNAKAGAV KTYYSIDIIE PVTLITDEIT VNPGNVATVQ FKISNPTSNV
KYYTANLTGP FFNESVVKTF SIAPGTVDKT VDMSFEVPEG LELENYQLVL KIFDPDKTEP
IYSGNIVLTI SESSLFLASV PGGNTTLILL AAAVLLIAGT FAALRLKK