| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5289 |
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| Symbol | |
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| ID | 5737247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009974 |
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| Strand | - |
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| Start bp | 77853 |
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| End bp | 80426 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641282453 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001548044 |
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| Protein GI | 159901799 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.752131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTC GAACCCTTAT CCCACCCCTT GTTGATGCTG TGTTAGCAGT GTGTCCTGTT
TATGAGCGTG CCACTATAGC CACGGCACTT GAACGAGTTC TTGTTGGTGA ACACATCACG
CTTGGCAATA ACACAATCTC AATGTTGTTT GGTCAAAATA ATGATTTTAG CAATGCAAAG
ATTATGATTG GTTCGATCCA AGCTGGACAT ACTATTTCTA TTAATGTTCA ACCTATCATA
GATAAATCTT TTTCTGATTC TACTCATACT ACCGATGATG ATTTAAAGCA AGCAAGGTTA
TTGCTATCTC ATATACCATT GGCCTCGCTA CCAAAGAAAG GGTTATTGCC TAAAGGTTCA
CGGATTCCCT TTAAAGATAA CCCTTTCTTT GTTGGGCGAG ACGACATGTT ACTTTCTATT
GCTAGTACTT TTTTTTCTTG TCACTCTGAT GCACCTATTC CGACTATTGG ATTAGTGGGA
ATGGGAGGGA TTGGAAAAAC GCAGTTGGCT GTGGAATTTG TCTATCGCTA CGGTTCATAC
TTTGCTGGCG GGATCTTTTG GCTTTCCTTT GCACAGCCAG ATTCGATTAA TACAGAGGTG
ATTGATTGTT ATAAATATTA CTGTCCACAA GTTATCGAAG ATTCGGCTGA AAAACAGATT
GCCTATATGA AATCCCTTTG GATGAATCCT TTACCTCGAT TACTAGTTTT TGATGACTGT
AACGAGGTTG ATTTGCTAGA GAAATGGCGG CCCCAATCAG GGGGATGTTA CGTGTTGGTC
ACGAGCCGTA GGCAGCAATG GCCTGCAACT GTAGAACTTT CCCTCCTGTC TGTATCAACA
CTTGATCTTG CAGGCAGCCT TGACTTACTT TGCCTTTATC GCCCTGATAT AAGAGAAGAC
CAAGCCTTAG GACAAAAGAT TGCTCAAAAA CTTGCTAATC TGCCATTAGC TATTCATATG
GCTGGAAGTT ATCTAGCACA CTATAAACTT AAGCTAGAAG TATATTTAGC CCAATTGGAT
CAAGGAATTA CCCACGAATC AATGAAGGGG AGAGGAACGT TCCATCAACC TACTAATCAT
GAAAGTGTTA ATGTTACGTT TAATATGGCG TTAAATAACC TTTCCAACCA TGAACCAGTG
AATATAATTT CACGTTTGCT CTTAGCTAGG ACAAGTTGGT TAATGTGTAA TGAGCCAATT
CCTAAAACAC TATTACAATC GTTTGCAGTA GATAAAGGGT ATGATGATTT AGATATTATA
GACTCTATAC ATAAAATTGT TAACTTAGGC CTCTTAGAAA TAACTATCCA TACAGGATTT
CGAATTCATG AACTGATAGC AGGATTAATA AAGGATAAAA TTAATGATGT TTCTGCATAT
TCAGATGTAG AGAGGATTTT AGGATCAAAA CTAGCTTCTC GGTCTACTTG GGAGGAAAGA
GAAGAATTAC AGTGGCTCAT TCCTCATGCA TATACAATTG TTCAATATGC ACTGAAGAGA
CAAGATACTA ATAGTGCAGA TTTTATGTAT GGTTTTGCAA GATCCCTCAA GAGAAATTCT
GATTATAAGG CATCTTTTAT GTATCATCAG AAAGCCCTAG CAATTCGTAA AAAAATCTTT
GGTGATAATC ATGTAAATAC AGCAAAAAGT TTGAATATGC TTGGGATGTT ATGTCGAAAA
ATGGCCAACT TTAATATGGC CAAGGAGTTT TATGAACAGG CATTAGAAAT TTATCAAAGA
GATTTGGGTG ATGATCATCC TACTACACTG AGTACTTTAA ATAATCTAGG CTATCTATTA
AAAGCGCAGG GCGATTTACT TCAGGCCCGG GAGTGTTATC AAAAAGTACT AAAGAGTCGT
CTTATAAATA GAGGGGAGGA ACACAGAACT ACAGGTACGA TTTTTAATAA TTTAGGCATG
GTTCTAAAGG ATCTGGGTGA TTTAAAATCC GCCCAAGAAC ATGTAAAGAA AGCAGTAGAA
ATTCGTAAAA GGATATGTGG TGATAACCAT CCCGATACTC TTATAGCTCT ATATAATTTA
GCTAGCATTC TTTTTGATTT AGGGTTGATT GAGGATTCCT ACAAAGTTGC AAAATCAGTC
CTTGACGATC GTTGCCGTAT TTTAGGGGAT GAACATTCTA GTACTGCAAG TAGTTTGTAT
CAGGTTGGAA AATTGCTCCA TACTAAAGGT GAGATTGATT CAGCGCTGTA TAATCTTGAG
AAAGCATTGA CGATTCAAAA GAAATTGCTT GGTATTGATA ATCCATATAC AGCTTTAACA
CTTCAAGAAT TGGGTAGGTT GTTTCAATCA AAAGGAGAGT TTGAATTGGC ACGACATAAT
ATTGAGTATG CGCTTGGTAT TCAACAAAGA ATATTCGGAT TAAATCATCC TGCTATCGGT
TTAAGTTTTC ATAATCTAGG TGAATTATAT GAGAAGATGG GGAATTTGCA GATTGCTCAC
TTCTACTATA AGCAAGCATT AGAGGTTAGA ATACATATTC TTGGAGAAAA TCACCCATCA
ACAATAGGCA CAATAGATTG CCTTAATCGT AGCAGTAATT GGAATAAAAT ATAG
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| Protein sequence | MDIRTLIPPL VDAVLAVCPV YERATIATAL ERVLVGEHIT LGNNTISMLF GQNNDFSNAK
IMIGSIQAGH TISINVQPII DKSFSDSTHT TDDDLKQARL LLSHIPLASL PKKGLLPKGS
RIPFKDNPFF VGRDDMLLSI ASTFFSCHSD APIPTIGLVG MGGIGKTQLA VEFVYRYGSY
FAGGIFWLSF AQPDSINTEV IDCYKYYCPQ VIEDSAEKQI AYMKSLWMNP LPRLLVFDDC
NEVDLLEKWR PQSGGCYVLV TSRRQQWPAT VELSLLSVST LDLAGSLDLL CLYRPDIRED
QALGQKIAQK LANLPLAIHM AGSYLAHYKL KLEVYLAQLD QGITHESMKG RGTFHQPTNH
ESVNVTFNMA LNNLSNHEPV NIISRLLLAR TSWLMCNEPI PKTLLQSFAV DKGYDDLDII
DSIHKIVNLG LLEITIHTGF RIHELIAGLI KDKINDVSAY SDVERILGSK LASRSTWEER
EELQWLIPHA YTIVQYALKR QDTNSADFMY GFARSLKRNS DYKASFMYHQ KALAIRKKIF
GDNHVNTAKS LNMLGMLCRK MANFNMAKEF YEQALEIYQR DLGDDHPTTL STLNNLGYLL
KAQGDLLQAR ECYQKVLKSR LINRGEEHRT TGTIFNNLGM VLKDLGDLKS AQEHVKKAVE
IRKRICGDNH PDTLIALYNL ASILFDLGLI EDSYKVAKSV LDDRCRILGD EHSSTASSLY
QVGKLLHTKG EIDSALYNLE KALTIQKKLL GIDNPYTALT LQELGRLFQS KGEFELARHN
IEYALGIQQR IFGLNHPAIG LSFHNLGELY EKMGNLQIAH FYYKQALEVR IHILGENHPS
TIGTIDCLNR SSNWNKI
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