| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5271 |
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| Symbol | |
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| ID | 5737229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009974 |
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| Strand | - |
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| Start bp | 53865 |
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| End bp | 56726 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641282435 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001548026 |
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| Protein GI | 159901781 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.650809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTGC CAGCCCTCAT TGCCGTTCTG GTCGATGCGA TTCTCATCAA ATGCCCACAG
TATGATCGGG CGAGCGTGAC TATTGCGCTC GAATCAGTCT TTGCGGGTCA TCCCACGCTG
TTGGGTGGCA ACTCCATTTC GATGCTGCTT GGCCAAAACA ATGATTATAC CAATGCCACG
ATCACGATTG GCGATGTCAA TGCCGGAAAT CAGGTGCATG TCACGGTGAC GCTCCCCCAG
CCGATTGATC CCTTACCCGC TGCCCTTGCA GCCCTTGCCT CGATTCCCTT GACAGATGTG
CCCACGCCGC GTTCCGATCT CCCCCAAGCC TCACGCCTGC CCTTTGAATC GAGTCCCCAT
TTTGTTGGGC GCGAGGCCGA ATTGAACGCG CTCGCGCAGG CGATTGGCAC GGCGCAGCCA
GCGGTTGTTA TGCCAGCGGT GGCCACGGGT CTTGGCGGGA TTGGCAAAAC GAGCCTGGTG
ACGGAGTTTT CCTATCGCTA TGGGGTGTAT TTTCAGGGCG GGGTGTTTTG GCTGAACTGT
GCCGATCCTG ATCAGGTGGC CAATCAAATT GCGGCCTGTG CGGTTGGCTT GAAGCTTGAT
ACCACCGGAA TGGCACTCGA TGAGCAGGTG CAACGGGTTT TGCATGCCTG GCAATCGCCC
ATGCCGCGCT TGCTCATTTT TGATAACTGT GAAGATCCAG CGATTCTTGA CCAATGGAAG
CCTACGGTGG GCGGCTGTCG CGTACTGGTG ACGGCGCGAT CCGATGCGTG GCCAACACTC
ACGCAGATTC GGCTTGGGCT GTTGTCGCCT GTCGAAAGTC GCGCGTTATT GCAGCGACTC
TGTGCGCGGT TGACCGATGC TGAAGCCGAT GCGATTGCCG AGGATCTGGG GCATTTGCCG
CTGGCGTTGC ATCTGGCGGG CAGTTATCTC GCAACCTATC CCCATCATAC GATTGGCCAA
TACCGCAAGG ATTTAACGAT TGCCCACCGC TCGCTCAAGG GACGGGGAGC ACTGCCCTCA
CCCACGCGCC ATGAACTGGA TGTCGAAGCG ACCTTTATGC TCAGTTTTAA CCAGCTTGAT
CCCAATAATG CGCTTGATGC GTTGGCCTTA GGCATGCTCG ATGGCGCGGC GTGGTGTGCG
CCAGGTGTGC CAATCCCGTG TGATCTGGTG CTGGCGTTGG TGCTTGCCGA GGCTGGTGAC
GATGGACATC CGAGTCGAAC GACGGATCGT GATGATGCGG TTGATGCCCT GCGTCGTTTG
CAGCAGCTTG GATTGCTCAA TGGCACTGAA CTCGTCGTAC TGCATCGCTT GCTGGCGCAA
GTTGTCCAGT CGCGGTTAGG ATCGTTAGAC ATGTTGGCCG AGGTTGAATC GTGTCTTGCA
TGGGTAACGG CGACGGTAAC GGCGAGCGGG AACCCGCAAC GGTTGACACC CCTGATTGCC
CATATGCGGT ATGTGACCCT ACGGGCATTA GACCGTGGCG ATCTGGTGGC GATTCAGTTA
GCCGATCAGC TTGGCGCATT TGAGCAATTG CACGGTGCCT ATGCCGCCGC ACAGATCGTC
TATGAACGCG CACTCGTCAT TTGTGGGTCA CACCTTGGTA TGGGGCATGT CATAACCGCA
GGAATCCTCC ATAATTTAGG AGTTACTCTC GCCCATCAAG GGCGGTATAA GGAAGCCCAA
GCATGGTATG AACACGCATT GGTTATTACG GAGCAGGTAG TGGGTGCGGA TCATCCATAT
ACAGGGGGGA TTCTGTCGAA TTTGGGGGTC GTTTTGGATC ACCAGGGCGC GTATGCTGAA
GCCCTGCCAT TAATCGAACG AAGCATCGCG ATTCGGGATA GGGTGTTAGG AGCCGATCAT
CCCGACACCG CGATGTCCTT GAATAATCGT GGTGTTGTGC TCGAACACCA AGGACGATAT
CGCGAGGCGC AGCACTGCTA TGAACAGGCG GTGGCGATCA CGACCGCTCT CGTGGGAGAT
AGCCATCCGA CAACGGCAAA GTATCGGAGT AATATCGCGC TGATGTTGGA GCGGCAAGGA
CAGTATGCTG CTGCTGCACG CATTCATGAA ACGGTTGTTG CGATCATCGA AACCGTCTTG
GGTGCGGAGC ATCCGGATAC CGCGATGAGC CTCCATAATT GGGCCTTCGC GTTAATCAAC
CAAGGGCAAG CAGCCCAGGC GCAGACCCTT ATGGAGCGGG CGATTGGGAT TAATGAACGT
GTTCATGGAA GGGAGCATCG AGCGACCGCA CTCTGCATAC ACCATCTCGG CCTTGCGTTG
ATTCACCAAG AACGCTATGC GGAGGCGCAG CCCATCTTGG AGCAGGCGAT TGGGATCTAT
GAGCGGGTCG TAGGACCACG GCATCCCGAG ATCGCAGCAG TTATCAGTAA TTTGGGAGGA
GTCCTTGCGC ATCAAGGGCG GTATGGCGAT GCGGAGCAGT GCTATGAACG GGCCTTGGCG
ATACGGGAAG CGGTGTTGGG GTCGGAGCAT CCCGATACGG CGACAACAAG AAATAATCTG
AACAGTCTGA TTACGGCTAA AGGGTATGGT CTCCGAGCCG TACTCCTTAA TAATTGTGCG
GTTTTGTTCG CGTCCCAAGG CTGTTTTAAG GATGCCCAAT ATCTGTTTGA ACAGGCGCTG
GCTCTTTATG AGCCGTTACT CCGCCTCCAC CATTCCGATA CGACAACCGT TATTGAGAAT
ATGGGATGCC TGCTTATGCT TCAAGATCGA TCAATTGAAG CGGTTGGATT AATCGAACGC
GCATGCATGC TGTATGAACA GAGTATTGGG CGAGATCATG AAATGACCAA TCGACTACGG
GTATATGGTG CCGAATTGAA GGAATCTATC CAGTTCCAAT GA
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| Protein sequence | MELPALIAVL VDAILIKCPQ YDRASVTIAL ESVFAGHPTL LGGNSISMLL GQNNDYTNAT
ITIGDVNAGN QVHVTVTLPQ PIDPLPAALA ALASIPLTDV PTPRSDLPQA SRLPFESSPH
FVGREAELNA LAQAIGTAQP AVVMPAVATG LGGIGKTSLV TEFSYRYGVY FQGGVFWLNC
ADPDQVANQI AACAVGLKLD TTGMALDEQV QRVLHAWQSP MPRLLIFDNC EDPAILDQWK
PTVGGCRVLV TARSDAWPTL TQIRLGLLSP VESRALLQRL CARLTDAEAD AIAEDLGHLP
LALHLAGSYL ATYPHHTIGQ YRKDLTIAHR SLKGRGALPS PTRHELDVEA TFMLSFNQLD
PNNALDALAL GMLDGAAWCA PGVPIPCDLV LALVLAEAGD DGHPSRTTDR DDAVDALRRL
QQLGLLNGTE LVVLHRLLAQ VVQSRLGSLD MLAEVESCLA WVTATVTASG NPQRLTPLIA
HMRYVTLRAL DRGDLVAIQL ADQLGAFEQL HGAYAAAQIV YERALVICGS HLGMGHVITA
GILHNLGVTL AHQGRYKEAQ AWYEHALVIT EQVVGADHPY TGGILSNLGV VLDHQGAYAE
ALPLIERSIA IRDRVLGADH PDTAMSLNNR GVVLEHQGRY REAQHCYEQA VAITTALVGD
SHPTTAKYRS NIALMLERQG QYAAAARIHE TVVAIIETVL GAEHPDTAMS LHNWAFALIN
QGQAAQAQTL MERAIGINER VHGREHRATA LCIHHLGLAL IHQERYAEAQ PILEQAIGIY
ERVVGPRHPE IAAVISNLGG VLAHQGRYGD AEQCYERALA IREAVLGSEH PDTATTRNNL
NSLITAKGYG LRAVLLNNCA VLFASQGCFK DAQYLFEQAL ALYEPLLRLH HSDTTTVIEN
MGCLLMLQDR SIEAVGLIER ACMLYEQSIG RDHEMTNRLR VYGAELKESI QFQ
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