Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_5267 |
Symbol | |
ID | 5737225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009974 |
Strand | - |
Start bp | 42419 |
End bp | 44341 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641282431 |
Product | TPR repeat-containing protein |
Protein accession | YP_001548022 |
Protein GI | 159901777 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.433566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGTCC CCGCGCTCAT ACCCATCGTG GCCGATGCCA TTCTTGCCCA CTGCCCCCAG TATGATCGTG CGAGTGTTAT GATGGCCCTC GAATCGGTCT TTGCTGGCCA TCCTGCGTTG CTTGGTGACA AGACGATCTC GATGCTATTT GGCCAGAACA ATGATTTTAC CAATGCCACG GTGACGATAG GCGACGTGCA TGCAGGCTAC ACGATGAACG TCCACCTCCC GCAGCCGCTT GATCCGACTC TCGCCGCGCT CATTGCCCGT GCCTCGTTGC CTGCCACCAT CCACCATGGG GATATGACGA TCAACGAGAG TGGTGTTTCA GGGGTTGTTG TCCGCGATAA TTATGGGTCA ATTCATCAGA CGATTCACCA GCCCCAGCCG ATTGATCCGC TGCCCGCTGC CCTCGCTGCC CTTGCCTCAA TGCCGCTTGG TTATGTACCA GAACCCCGTG CGGATTTGCC CCACCCCTCA CGCCTGCCCT TTGAAGCCAG CCCGCACTTT GTTGGACGCG AAGAAGCATT GAAACAGTTG GCACAGGCGA TTGGTTCAGC CCAACCAGCG GTCGTCATGC CAGCGGTGGC CACAGGGCTT GGTGGTATTG GCAAAACCAG CCTCGTCACC GAATTTGCCT ATCGCTATGG AGTCTACTTT TATGGCGGGG TGTTTTGGCT GAATTGTGCC GACCCCGATC AAGTGGCCAG TCAAATAGCC GCGTGTGCGG TTGGCTTGAA ACTTGATACT ACTGGGATGG CGCTCGATGA GCAGGTGCAA CGGGTTCTCA ACGTTTGGAA ATCGCCCATG CCACGCTTGC TGATTTTCGA TAACTGTGAA GATCGCGTAC TGCTCAAACG GTGGAAGCCC ACGGTCGGCG GCTGTCGGGT GCTGGTGACT TCTCGATCCA ATCAGTGGCC AACCCTAACC CAGATCCAGC TTGGGGTGCT CTCACCCGTA GAAAGTCGAG CACTCTTGCA GTCGCTCTAT AGTGATCTCA CGGATGCTGA CGCTGATCTG ATTGCGGAGG ATCTGGGACA TTTACCACTC GCGTTACATC TGGCAGGAAG CTATCTTCAT ACCTATCGGC CTACGATTAC GGCGTATCGT GCTGCCCTCA GTATTGCCCA TGAATCGTTG CATGGGTATG GAGCATTTGA CTCGCCAACC GAACATGAAC AGAATGTCGA CGCGACGTTT ATGTTGAGTT TTAACCAGCT TGATCCGGAC AACACGATTG ATGCCTTGGC ATTGGGCATG CTTGATGGGG CGGCGTGGTG TGCGCCGGGT GTACCAATTC CGCGCGAGTT GGTGCTGACA TTCATGCCGG ATGAGACAAC CCATACCGCC AGGGTTGATG CGTTGCGGCG CTTACAGCAG CTTGGATTGC TCGATGGCAC GGATGCCGTG GTGTTACACC GATTGCTCGC TCAGGTTGTG CAGGCACATT TAGGATCGTC CGAAACGCTG GCCGTGGTGG AAGACCGGAT TGGTGCTGCA GCATCCCGTG CGAATGGGAC GGGTGTGCCA CGTTCGATGC TGCCGCTTGC GCCGCATCTG CGGTATGCCA CCATGCGGGC GTTGGATCGT GGTGATGCCC AGGCAGCCCG CCTTGCCAAT AGTCTTGGTT TTTATGAAGA TCTGCGAGGA GCCTATGCTG CTGCAGAGGA GTTGCATGAA CGGGCCTTGG CGGTGCGGGA AGCGGTGTTG GGGGCGGAGC ATCCCGATAC GGCGACGAGT GTGAACAATC TGGCGGTGGT CTTGAAGCGG CAAGGGCGGT ATGCTGAGGC GCAGCGCTTG TTTGAACGGG CCTTGGCGAT CAGGGAAGCG GTGTTGGGGG CGGAGCATCC CGCTACGGCG ACGAGTGTGA ACAATCTGGC GGTGGTCTTG GAGGGTGGTT TGTCAAGAAG TGTGCAAAAT TAA
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Protein sequence | MDVPALIPIV ADAILAHCPQ YDRASVMMAL ESVFAGHPAL LGDKTISMLF GQNNDFTNAT VTIGDVHAGY TMNVHLPQPL DPTLAALIAR ASLPATIHHG DMTINESGVS GVVVRDNYGS IHQTIHQPQP IDPLPAALAA LASMPLGYVP EPRADLPHPS RLPFEASPHF VGREEALKQL AQAIGSAQPA VVMPAVATGL GGIGKTSLVT EFAYRYGVYF YGGVFWLNCA DPDQVASQIA ACAVGLKLDT TGMALDEQVQ RVLNVWKSPM PRLLIFDNCE DRVLLKRWKP TVGGCRVLVT SRSNQWPTLT QIQLGVLSPV ESRALLQSLY SDLTDADADL IAEDLGHLPL ALHLAGSYLH TYRPTITAYR AALSIAHESL HGYGAFDSPT EHEQNVDATF MLSFNQLDPD NTIDALALGM LDGAAWCAPG VPIPRELVLT FMPDETTHTA RVDALRRLQQ LGLLDGTDAV VLHRLLAQVV QAHLGSSETL AVVEDRIGAA ASRANGTGVP RSMLPLAPHL RYATMRALDR GDAQAARLAN SLGFYEDLRG AYAAAEELHE RALAVREAVL GAEHPDTATS VNNLAVVLKR QGRYAEAQRL FERALAIREA VLGAEHPATA TSVNNLAVVL EGGLSRSVQN
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