Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_5264 |
Symbol | |
ID | 5737222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009974 |
Strand | + |
Start bp | 37738 |
End bp | 40230 |
Gene Length | 2493 bp |
Protein Length | 830 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641282428 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001548019 |
Protein GI | 159901774 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGTAG CGGGGATTTT CGGAACGAAA ATGTTGTCAC CCCAACCACC GCAAACCCAT GCTACCATAG CACGCAGCAA TCACCTATGT AATCATCGGC ACGCAGATCA GACACGAGAG GAGCTTCCAC GAATGATCAG TTTCCACCCC TTTGGCGGCG CACAAGAAGT CGGCGCGTCG TGTGGCATTC TCAAACTGGG TATGCGCCAT ATCCTCGTCG ATGCGGGCAT GCGCCCTGCC GCCCGCCCTG GCCAATCGCG CACACCCGAT CTCGAAGCCC TCAAAGGTTT TCCGCTCGAT GCGATCCTGA TTACCCACGC CCACATTGAC CACACGGGCT GTCTGCCGCT CGTCGCCAGC TTGTTCCCGA CTGTGCCGAT CTATGCAACC GAAAGCACGA TCGCGCTGAT GCGGATTTTG CTGCTCGACA GTGCGCGGAT TATGGAACAG GAACACCTCG CGCATGAACT AGAAACGCCC TTGTATGACC AAGCGATGGT CACCGAAACC TTGGCGCGGA TCATTCCCGT GGCGTTTCAC CAAGAGCTGC GTCCCGTGGC CGCCAATCAA GAAATTAGCG TGACCTACCT GCCCGCAGGC CATATCCTCG GCGCGGGCAT GTTGCATATC ACGAGTCCAT GGGGCAGTAT CTTGCACACG GGCGATATTT CGGTCGGCCA TCACCGCACC ATCACGGGCG TTGACCTGAA CACCTTGCCG CAGGTGGACA TGATGATTTG TGAAGGCACC TATGGCAACC GCAGCCATAA ATCGCGCAAA GACCAAGAGC AGAACGTGGT GGCCACGATT CAACAGGTGA TTGGCCACGG CGGGCGGGTA CTGATTCCGG CCTTCGCGGT GGGCCGTGCC CAAGAACTGA TCTTGATCCT CAAAGCCTTC CGCACCTCCG GCGTGGTGTC GCCCGTGACG ATCTATGTGG ACGGCATGTG CAAAGCGGTC TGCGAGTCGT ATCAGCAGCA ATCGCATGAC CTGCATCCGG CGCTGCAAAA ATTCTTGGCC AATAGCCAAC GCCCGTTGTT CGTCGATCCG AGCTTTGGCG TGCTGGCCGT GCATCAGGGG ATGCGCCCGC GCGTGATTCA GAGTGATGAG CCAGCGATTA TCATCAGCAC GTCGGGCATG CTCACAGGTG GGCCAGCGCC GCTGTATGCG ACGAAGTTAG CCCAAGACCC GCGCAATGCG ATCATTTTCA CGGGCTATCA GGATGAAGAA TCGCCAGGCG CGGCGATGCT CAAAGCCACC CAAGGTGGAA CCATCACGTT GAATGGCCAA CGGGTGACGC TGGGCTGTCC GGTCTATCGC TATGGCTTGT CGGGCCATGC CGATCTGGGC CAACTCGAAC AGGTGATTCG GCTCGTCCAG CCACAACAGT TAGTCTTGGT GCATGGCGAT CACGATGCCC TCAGTCACCT CGCGGCCCGC TTCAAAAAAC TGGCAGTGGC CATTCCCGCT GCGGGCGATG TCGTCACCCT GACCCGCCGT GCGCCGACCG TGAGTCTGCA AGCGGGGCAA CGACTGGATA TGCCTACCGC TCTGCCGGTG GCGGTGGAAG TGGTGGCCGA CCCTACGCCG CTGAAGCCTG CGCCCACGTT GGCGGATTTG TACGCGATTG CCACCGCCAA TGGGATTCCT GCCCGCCCCT GGACAGCGAT TGAGCTTGGC GCAGCCTGGT ATGGCACAGC CTATCAGCCC ACCTTGCGAC CGATTGTCGA GGGCGTGTTA AGTGTCGCGC GGAGTCATTT CCGCACTAAA CGGCTCGGTA GCCAAACCGT GTTTACCCCG CGTCCAGTGC TAGAGAGTGG CGAGCCGAAC GTGGCCGCAC CACCCAAACC ACAGCCGGAT GATCGCTGGG ATGTCGTGCC GATTGGCCAG ATTGTCTTGG TGCTTGGCTC GGCAGCGCCA CCGGATCGCG TGCAGCTGGG GTTGATCACG GGTGAACCCA CGGGCAGTAC CGTGCCGCTG GTGGTCGAGG CGTGGAAAAG TCCCAGTCAA GTGCGCGATA CGATTCACGG GGTCACGCCG ATGAGCAAGC CAGAATGGGT GGGGCTGGAG CATGCCGAAA TTCAAGCCAA CTTGAAAGCG CTACGGGCGA CGGTGGATGC AATTCCGATT GATGTACTGA AACTCTGGCA GGCACAACAG GGCCAACCTG CGAGACTCGA AACGCTGATG GCCTCGGCTC CGACCCTGGA GGAACAGGTG GCCACGGGCA TCACGCTCAT GCGGCGGGGC TTGCTGGTCT GGAAACGCGA GGGGGTACGC TGGATTCCCA AGCCGTTTGA ATCCTTGAAT GATCAAGCGC TGATTACGCG GCACTTGGAT CTGATTACCC AAGTGGGAGC GACGGTCACG CATATTAAGG ATGGCCGCAC GGGCACGCTC ACGGGGCGGG GTGGCTGGTT GCAAGTCGAG GTGCGCTGGG ATTCGGGCGT GGTGGAGTTG GTCAAGGATG GCTTGGTACG GCTAGAAGGA TAA
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Protein sequence | MVVAGIFGTK MLSPQPPQTH ATIARSNHLC NHRHADQTRE ELPRMISFHP FGGAQEVGAS CGILKLGMRH ILVDAGMRPA ARPGQSRTPD LEALKGFPLD AILITHAHID HTGCLPLVAS LFPTVPIYAT ESTIALMRIL LLDSARIMEQ EHLAHELETP LYDQAMVTET LARIIPVAFH QELRPVAANQ EISVTYLPAG HILGAGMLHI TSPWGSILHT GDISVGHHRT ITGVDLNTLP QVDMMICEGT YGNRSHKSRK DQEQNVVATI QQVIGHGGRV LIPAFAVGRA QELILILKAF RTSGVVSPVT IYVDGMCKAV CESYQQQSHD LHPALQKFLA NSQRPLFVDP SFGVLAVHQG MRPRVIQSDE PAIIISTSGM LTGGPAPLYA TKLAQDPRNA IIFTGYQDEE SPGAAMLKAT QGGTITLNGQ RVTLGCPVYR YGLSGHADLG QLEQVIRLVQ PQQLVLVHGD HDALSHLAAR FKKLAVAIPA AGDVVTLTRR APTVSLQAGQ RLDMPTALPV AVEVVADPTP LKPAPTLADL YAIATANGIP ARPWTAIELG AAWYGTAYQP TLRPIVEGVL SVARSHFRTK RLGSQTVFTP RPVLESGEPN VAAPPKPQPD DRWDVVPIGQ IVLVLGSAAP PDRVQLGLIT GEPTGSTVPL VVEAWKSPSQ VRDTIHGVTP MSKPEWVGLE HAEIQANLKA LRATVDAIPI DVLKLWQAQQ GQPARLETLM ASAPTLEEQV ATGITLMRRG LLVWKREGVR WIPKPFESLN DQALITRHLD LITQVGATVT HIKDGRTGTL TGRGGWLQVE VRWDSGVVEL VKDGLVRLEG
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