| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5252 |
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| Symbol | |
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| ID | 5737210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009974 |
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| Strand | - |
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| Start bp | 22374 |
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| End bp | 24107 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641282416 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001548007 |
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| Protein GI | 159901762 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.56302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAAC GTGCCGCTGC GCCTGCGTGG CAACAACTCC AAATGCAGAT TACCTGCCCC
AAACAGTATC TCTATGAACT CATTCGCCCC ATTGTCTTAA CCGAAGAGTC GGTGGCCGAC
CGCGCTAGCG AAACCGCCGT GCCCGATCAC ATCATCACCT ATCATCTTGA CCATTTTCGC
ACCAATGGCT TACCTGGCTT GGTTGCCGCT CCCACGCCCC TCCAACGCGC TGCCCGCTTT
CCCGAAGAAT TGGTCGCCTT TGTGCTGGCG CTCAAAGCGG AGCATCCGCC GCTCACCGCC
CATGAACTGG CTACGATTTG TTTTATCAAA CACGGTCGGC GGCCCAGTAT CAAAACCATT
CGGCGCGTGC TCGCCCATCA CCCGCTCCCG CAGCTCACCA CGCGGCGGTT CCCTCCGTTC
CATGACAATC CTGATCCCAT CCAACGCCGC CACGCCATCC TGGTCTTAAG CCTTGAGGGC
TGGACGAAAA AACGGATTGC GACCTATCTT CAGATTAGCC GTTCCACCGT GTACAACACC
TTTGCACGCT GGCACAAGGA GGGCTTCGCA GGGTTACAAG CAAAGTCCCG TGCGCCGCGC
CGTCGCCATC CCAAAGTCAC CATCGCTATC CAGCAGCGGG TTCGCCGCTT ACAGCGCAAC
CACTTGTTGG GTGCGTGGCG CATGCATGCC GCTCTGCGCC GTGAGGGCAT CCGCCTCAGT
CCGCGCACCT GTGGGCGCAT TATGGCGGTC AATCGCGACC TCTGCCCCGA ATTGCCCAAA
CGGCAGCGAT CACGGAAGCA TGAACCGCGT GCCATGCCCT TTGCTGCCCA GTACCGACAT
CAGTACTGGA CGATTGACAT CCGCTATCTC GATATGCACC GCTTGGGTGG CGGCCATATT
TACTGTATCT CGATTGTCGA AAATTACAGC CGCGCCATTC TTTCCAGCGC GATCAGTCGG
ATTCAGGACA CCACTGCCGT GTTGAAAGTG CTCTATGATG CGGTGGCAAA GTACGGCTGT
CCTGATGGGA TTGTGAGCGA TTCAGGCAGT GTGTTCCGCT CGCATCGGCT CCAGGAGGTG
TGTCAGCACC TGCGGATTCA GCAGTGCCCG ATTGAGAAGC GCCAACCCTG GCAATCCTAC
ATCGAGACGA CCTTCGGTAT CCAACGGCGT ATGGCTGACG AAGCAGAGGA GGGGTTTCGG
GCCGCGCAGA GTTGGGATGC GCTCTGGCAC GCGCATCGCA CATGGCTACT CCACTACAAC
ACCGAAGTGC ATTGGGCACA TCGGCAGCGC CAAGATGGGC GAGAAACGCC AGCCGAAGTC
CTGACGTGGA TTCGCGGTCG CCCCTATCCG GAACGGCTGC TCCAGCGCAT TTTTGCCGCA
ACACGGGTGA AACGGCGTTT GGATCGGGTG GGCTTTCTGC GGGTGCGCCG CTGGCGGATC
TACAGTGAAA TTGGCTTGGC CAAGGAAGCC GTTGAGGTAT GGCTGGAGGC GCAGCATGTC
ACGATTACCT ATGCGGATCA CCACCTGCGG TCGTATCCGG CGACGATTGA TACCGATGGG
TGGATACGGA CGATGGAGAC GGGCACGCGC TACGAGCATC CCTTTGGGAG TCGGCAGTTA
ATGCTGTGGG ATGTGATTGA AGACGACTGG GGCAAGACCC AGTATGTCGG CAGTACGCCG
CGCCGAAAGT CCACCATCCC CCTCGCAGAG CAGTTGCGCT TCGCTCTTGG GTAA
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| Protein sequence | MPKRAAAPAW QQLQMQITCP KQYLYELIRP IVLTEESVAD RASETAVPDH IITYHLDHFR
TNGLPGLVAA PTPLQRAARF PEELVAFVLA LKAEHPPLTA HELATICFIK HGRRPSIKTI
RRVLAHHPLP QLTTRRFPPF HDNPDPIQRR HAILVLSLEG WTKKRIATYL QISRSTVYNT
FARWHKEGFA GLQAKSRAPR RRHPKVTIAI QQRVRRLQRN HLLGAWRMHA ALRREGIRLS
PRTCGRIMAV NRDLCPELPK RQRSRKHEPR AMPFAAQYRH QYWTIDIRYL DMHRLGGGHI
YCISIVENYS RAILSSAISR IQDTTAVLKV LYDAVAKYGC PDGIVSDSGS VFRSHRLQEV
CQHLRIQQCP IEKRQPWQSY IETTFGIQRR MADEAEEGFR AAQSWDALWH AHRTWLLHYN
TEVHWAHRQR QDGRETPAEV LTWIRGRPYP ERLLQRIFAA TRVKRRLDRV GFLRVRRWRI
YSEIGLAKEA VEVWLEAQHV TITYADHHLR SYPATIDTDG WIRTMETGTR YEHPFGSRQL
MLWDVIEDDW GKTQYVGSTP RRKSTIPLAE QLRFALG
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