| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5246 |
|---|
| Symbol | |
|---|
| ID | 5737204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009974 |
|---|
| Strand | - |
|---|
| Start bp | 15778 |
|---|
| End bp | 17985 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641282410 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001548001 |
|---|
| Protein GI | 159901756 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGATT GGATGGATAA TCTTGTCCAA CAACCCCTCT ACCAATTAGA ACAAACCATT
GCCCAAGTGA CCTGGGGTTT TAATCGTGCA GGCTTGTTCA TCATTGACGT ATTAGACCGT
TTTCGGGCGC AGCTGGTGAG CCACGGCTTT ACCAAGGCGC TGGATACGGT CAGCACCGAG
ATCTTGGGGA TCAGCCGCCC CGTGGTCGAA CTGTCGTTGA CGATTGGCAT GCTCTTAATC
ATTGCCACGC CCGTGATTCG CTTTCAGTGG GTGAATATCA AGAAGGTCTT AGGCTTGGCG
GTGATTGTCC CCTTGCTCTT GCCCATGCTG GCGGGAGGAT TCCAAGACAT CGACGCGGCC
CGCAGTGACT TAGGGTCGCT GTTTTATAAC CAAATCTTCA GCGGGTCATC CTTTAATATC
GCGCCTGGCG ACGCGAACCA AGGCACGGAT CGCGGCATTT TGGTGGATGG CAGCGGCCAG
ATTCCGGCGT ATGGACCACG CAATGATGGG CGTTCCGGCT TACGCGGCGT GGACATCGCA
GCATCCTATC TGTGGGCGAC GCGGGCGGAT GTGATGGAGA GTAGCCGCCT GTTACCGACG
GCGTTTGAAC AGCAGTATTT TCCCTACGAT ATTGGCGCGT TTGGGGATCA GGACAGTGCG
GTGCGCTGGC AATTGATTGA ACGCGCAGGC GGCGGAATTA CCCGCACGGT GTATGGTTTG
ATTCTGGTGG CCTTCGCATT CCTCGAAACC TTAATCAACG TGGCCTTTAC GCTTGCGTTA
GGCTTTCAGT TGATTGCCCT GATCATCGCC ACCTTGTTTA TGTGGTTTAC CCCGTTTGAG
GGCATGGTGG TCGGCATCAT TAAAAAGATG GCTGATTTGA TGCTGCAAAG TTGGGGGATT
AGCGCCGTAC AAGGACTGAC CTTAGCCGCC GTGGTCGGTG CCGCGAACCA AAGCGGCTCG
ATTGCGGTGC TGGGCGTGGG CATTCTTGGC TTAGCCCTCG AAATTGTCTA TGTCACCGTG
GCCTATAAGG CGGTGATTGG CGCGATCACG GGCATGGGCA GCGGCGGCGG CATCAGTTCG
GTCGGGCGGG CGTTGGCTCC CGCTGCGGCG TTGGCGACGG GGGGGATTGG CGCTGCCGTG
GGTATGGCAA CCGCTGCCCC GAAAGCCGCA GCCGCTTATG CCACCGCCCG CCAGTCAGGA
GCCAGCAGTA GCGCGGCGCT TGGCTACGCG GCCCAAAGCA ATCGACCGCT GGCCGCGATC
GGCAACCTTG CCACGTTGAT GGGCTACGGC AATAGCGAGT TTACCGCCGG AGCGGCGATT
GGCCAGAACG CACGAGAACG GCGCTACGGC ATGCACAGTC CGATGGCTCG CCATCAACTC
GGGATGCACG CCGACCGTGA ACAGCAACGC GGCGAACGCC AGCAGGATCG CCAAATGGCC
ATGGCCCGCC AGCAGCAGCA GGAGGCAGAT CGGGTGCAAG CAATGGAGCG GCAGGCCCAG
CAGGCCATGG TGCGCGACCA GGCACAGGCA CGCCAAGCCC AACAGGATGC CGAACGCCAG
GCCGAGCGCC AAAAACGCAT GGCACGGGAA GCCTATGAAG CGCCGATTAA GGCGATTGGC
CGACCGCAGA TTACCGAGGC CATGACTAGC GCGTATGTCA GCGCGTATGC GAGCGACCCA
ACCAGCCCTG CCAGCGTGGA CAGCGTGACC AGCGCGATGG GCCTTGCGCC AGGTGCGTTT
GGCCACCAAA CCGCCGCCGT GCAGACCGTG TTGGAGAGCT TGCACCAAAC GCCATTTGCG
CCGGATTTGG CCCAACGTTT GATGGTGGAG GCTGGACAGG AAGGGCAATT CCGACCCGAC
ACCCGCGCCG AGGCCCAAAA CGACCTCATT GCCAGTGGGA TGCGTGAAAC CGCAGCAACC
CGCCGGATGC AGACCATGGA GCAGCAGATG CAGCGCGTGC CAGGCGCGAT CCAGGTGAGC
GATGCCGAGG CCGCCGCTGC GCTTCAGCAG CAATCCAGTG CCTATGCAGG CTATAGCGCC
GAGCATCGCC AGCGACCCAT TGAACGCGAC CCGGTGATTA CGCCGACACC CGAACGGCTG
GCGAGTCCCC CACCCGCTGC CTTGACCGCG CCAGCGGAAC AACGCCGGAC AACGGGCTAT
GGGCGCACGC CGCGCCGATC CCGCGCGGGA CACTCAGCGA CTCGATAA
|
|---|
| Protein sequence | MPDWMDNLVQ QPLYQLEQTI AQVTWGFNRA GLFIIDVLDR FRAQLVSHGF TKALDTVSTE
ILGISRPVVE LSLTIGMLLI IATPVIRFQW VNIKKVLGLA VIVPLLLPML AGGFQDIDAA
RSDLGSLFYN QIFSGSSFNI APGDANQGTD RGILVDGSGQ IPAYGPRNDG RSGLRGVDIA
ASYLWATRAD VMESSRLLPT AFEQQYFPYD IGAFGDQDSA VRWQLIERAG GGITRTVYGL
ILVAFAFLET LINVAFTLAL GFQLIALIIA TLFMWFTPFE GMVVGIIKKM ADLMLQSWGI
SAVQGLTLAA VVGAANQSGS IAVLGVGILG LALEIVYVTV AYKAVIGAIT GMGSGGGISS
VGRALAPAAA LATGGIGAAV GMATAAPKAA AAYATARQSG ASSSAALGYA AQSNRPLAAI
GNLATLMGYG NSEFTAGAAI GQNARERRYG MHSPMARHQL GMHADREQQR GERQQDRQMA
MARQQQQEAD RVQAMERQAQ QAMVRDQAQA RQAQQDAERQ AERQKRMARE AYEAPIKAIG
RPQITEAMTS AYVSAYASDP TSPASVDSVT SAMGLAPGAF GHQTAAVQTV LESLHQTPFA
PDLAQRLMVE AGQEGQFRPD TRAEAQNDLI ASGMRETAAT RRMQTMEQQM QRVPGAIQVS
DAEAAAALQQ QSSAYAGYSA EHRQRPIERD PVITPTPERL ASPPPAALTA PAEQRRTTGY
GRTPRRSRAG HSATR
|
|---|
| |