Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_5215 |
Symbol | |
ID | 5737173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009973 |
Strand | - |
Start bp | 307940 |
End bp | 310012 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641282379 |
Product | hypothetical protein |
Protein accession | YP_001547970 |
Protein GI | 159901724 |
COG category | [S] Function unknown |
COG ID | [COG3472] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.741994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGATA CCCAAAGCCA AACGGAATCA CTGCTTGATA TTGTTGCTGG TATTAAACAA CGCACGATTA TGTTGCCAGA ATTTCAGCGC GATTTTCGCT GGGAATTGCC GCAAACCTAT GATCTGTTTG ATTCCCTGAT TCGTGACATC TTTATTGGGA CGGTTATTTA TGGGAAACCG TCGTTTGAAA TGACCTTGCG CGAAATTGAT ACCCGTCCAC GGAAAGGGAA AGGGGCAAAT GCCCCGTTGG TTACCCACTA TTACTCGGCA CAGCAGATTA CCACAAAAAG CCAAACGCAA AATCTGCGCA TTGTGTTGGA TGGACAACAG CGCCTCACCT CACTCTATCG TGCCATTACT GGAGAAGGGA ATGACTCGGT GTTTGTGATT CTCCATGAAG GTATCGATCT GGAAAGTGTG AGCCAAAAAA GCTTAGAAGA ATTGGTAGAT CGGATTGCTG GTGAGGAAAG TCGGACAGCG ATTTCGGTCA AACTGTCCTT AGCCTATCTC TCAGAAACCG ATAGCTCGAT TGAACCAGAA GATCAATACC AATGGTTTGC CGATACTGTG TATGGCCGTG ATGTGATCCA AACAGCAGAT CTCGACTTCC AGAAAAAGGC TGAACGCGCC TATCGCCGCA TCCTGACGAA ACTGACGGAT CTCTTCAAAC AACAAAAAAT GGTTGCGTTT TATTTGCTCG ATATGTCGCT TGATAAATTT TGCTTGTTTT TTGAGCGCAG TAATAGTCGT GGTATCCAGC TCAATTTTAC CGACATTTTG GCTGCAAAGC TCTATCATGG CTTTAATCTC CGCGCCAAAA TTGAAGAATT TGAGAGCCAA GCAAAGATTA AGGTGAATCG TGAGATTATT ATTCGGGCGA TTGCCTATAT TGTTGGCTCG AGTCGTGGCC GAAGCCCTGA GATCGATAAA AAATATATCT TAGAGACGCT CAACGCGGAC GACTTTAACA CCTATTGGGA TGAGGTCTGC CGTTTATATC GTGAGTGCTT GGGCTATTTA ACCAATCAAC ACTATATTTT ATCGCAAGAC TGGATGCCCT TCGAGAATAT GGTCATCCCA CTCATGATGT TCCTCCGTCA GATTAAGAGC TTTGATCGCA TGAACGAGCA ACAGCGGAGT TTTCTTGAAT TTTGGTATTG GGCATCGATT TTTGCCAATC GCTATAGTTC AGCATCGAAT GCAACGATTA TCATCGATTG TAAGGTCTTG ATACAGGTGG CGCATGGTGA GCGGATTGAC AACCGCAGTT ATTTTATGCG TTTGCGGTCA TTAGTAACAG AATCCCTCGA TTTGTTGAGC TACACAAAAA AGACGAGTTC GATTTACCGA GGGATTCTGA ACCTGATCAA CTATGCAGCA AAAGGATTGC GCGACTGGAG TAATGCCCAG ATTCTTGATG TGAGTATGCG CCTTGAGGAT CATCATATTT ATCCACGGGG CTATATTACC AGTAAACCAG AACTGGATAT TGATCACAAT GAGGCAGAAC AATTAGTTGA TTGTGTCGTG AATCGCACCC TGATTCCGAA AATTAAGAAT ATCACGATTG GGAAAAAAGC ACCCTATACC TATCTGGCGG ATTTAGCCAC GCAGAATAGT CAGCTTTCGC TGAGCCTTGC AACCCATTTG CTACCAAAGG ATTTTGATAG TGAACCAACC TGGAATACGT GCTTTAAGCT CTTTTTGGAA GAACGGGCAC AGGCCCTCTT TGCGCTGATC GATAAGTATG TGATTGAGCC ATTGCCCGAT ATGATCCATC AGCATGCCGT TGTTGGTGAA GCGACGGAAC AACCCAGCGA GGGTCGTAAA CCACGATTTA ACGATATGGT TCAAGCAAAA AAGGTTGTGC CAGGCGATCA GCTTTATACG AAAAAATATC CGCAGCGGCG TGCGACAGTG GTTGATGGGG AGACCGTCGA GTATGACGGG GTACGCTATC CCATTAATGT GTGGGGTGAA AAAGTGACGG GATGGTCGTC GATTAATATT TATGATTCCG TGATATTAGA ACGAACGGGG AAGCCATTAA GAAGTTTACG CGAAGAAGGC TAA
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Protein sequence | MNDTQSQTES LLDIVAGIKQ RTIMLPEFQR DFRWELPQTY DLFDSLIRDI FIGTVIYGKP SFEMTLREID TRPRKGKGAN APLVTHYYSA QQITTKSQTQ NLRIVLDGQQ RLTSLYRAIT GEGNDSVFVI LHEGIDLESV SQKSLEELVD RIAGEESRTA ISVKLSLAYL SETDSSIEPE DQYQWFADTV YGRDVIQTAD LDFQKKAERA YRRILTKLTD LFKQQKMVAF YLLDMSLDKF CLFFERSNSR GIQLNFTDIL AAKLYHGFNL RAKIEEFESQ AKIKVNREII IRAIAYIVGS SRGRSPEIDK KYILETLNAD DFNTYWDEVC RLYRECLGYL TNQHYILSQD WMPFENMVIP LMMFLRQIKS FDRMNEQQRS FLEFWYWASI FANRYSSASN ATIIIDCKVL IQVAHGERID NRSYFMRLRS LVTESLDLLS YTKKTSSIYR GILNLINYAA KGLRDWSNAQ ILDVSMRLED HHIYPRGYIT SKPELDIDHN EAEQLVDCVV NRTLIPKIKN ITIGKKAPYT YLADLATQNS QLSLSLATHL LPKDFDSEPT WNTCFKLFLE ERAQALFALI DKYVIEPLPD MIHQHAVVGE ATEQPSEGRK PRFNDMVQAK KVVPGDQLYT KKYPQRRATV VDGETVEYDG VRYPINVWGE KVTGWSSINI YDSVILERTG KPLRSLREEG
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