Gene Haur_5193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5193 
Symbol 
ID5737151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009973 
Strand
Start bp278140 
End bp279210 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content56% 
IMG OID641282357 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001547948 
Protein GI159901702 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3409] Putative peptidoglycan-binding domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000362844 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGT ATTCACGGCG GTCATTCGGA AAACTGACCG TTGGCGTTGG GATGAGTGTC 
GTCGTTGGGT TGACTGAATT ACAGCTCCTT CGCCCCAGTC ATGCAGCCGT GGCCATCCCT
GCCATTGGGG GTACCGCCAC ATGGGGGGCC GCAGCACCCA AAGAACCGAT CAAACGCTTG
GCCCAGAAAC CGATTGGGAT TGTGGTGCAT CACACCACGA GTCCCAACAG CAATGATTTT
ACGCAGACCA AGGCGCGGCA GGTGGCCCGC TCCATTCAAC AGAGCCATTT TAATCGTGGC
TGGATTGATA CCGGACAACA CTTTACGATT AGTCGTGGAG GCTGGATTTT AGAAGGTCGT
CACCAAAGCC TTGCGGCGGT CCAACAGGGA ACAACCCATG TCCAAGGTGC CCATGTGGAT
GGGCATAATG AAACCCATAT CGGGATTGAA TGTGACGGCC TCTATATGGA GCACGCACCG
AGTCTCCCGT TATGGAACAA TCTGGTTGCG CTGCTCGCCT ATCTCTGCCA CCAGTATGGA
TTAACCGCCC AAACCATTGT CGGCCACCGT GATTTGGATG CAACCCTCTG CCCAGGAGAT
ACTTTTTACA GTCTCTTACC TCAGTTACGG GCAGCCGTTG AAACCCACCT CGCTGGCGGG
AATGTAGGAC GGATGTGGCC AACGCTGAAG CGGAATACGC CCGCAACCAG TTTAGCCAAA
ACGGCCCAAT ATCTCTTACG GACGCATGGC GCGAGTATCA CGGCCGATGG CGCGTTTGGC
CCTGCCACCG AGGCGGCGGT CAAAGCCTTC CAAACCGCGA AAGGGCTGAC CGTTAATGGA
ATCATCGGCG CGGCCACATG GGAAAGCCTG ATTCGCACCG TGCGCCTTGG CGACAGTGGT
GATGCCGTCC GTGCCGTCCA AACGCGACTG GCCGCCCAAG GCTATACAAC CACCAGTGAT
GGCCAGTTTA CGGCAACCCT GAATGCCCTT GTCAAAACCT TCCAAACCAA TCGCCAACTG
AGTGTCGATG GAGTGGTTGG GATCAATAGT TGGAATCATC TCGCGATGTA A
 
Protein sequence
MKQYSRRSFG KLTVGVGMSV VVGLTELQLL RPSHAAVAIP AIGGTATWGA AAPKEPIKRL 
AQKPIGIVVH HTTSPNSNDF TQTKARQVAR SIQQSHFNRG WIDTGQHFTI SRGGWILEGR
HQSLAAVQQG TTHVQGAHVD GHNETHIGIE CDGLYMEHAP SLPLWNNLVA LLAYLCHQYG
LTAQTIVGHR DLDATLCPGD TFYSLLPQLR AAVETHLAGG NVGRMWPTLK RNTPATSLAK
TAQYLLRTHG ASITADGAFG PATEAAVKAF QTAKGLTVNG IIGAATWESL IRTVRLGDSG
DAVRAVQTRL AAQGYTTTSD GQFTATLNAL VKTFQTNRQL SVDGVVGINS WNHLAM