| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5165 |
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| Symbol | |
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| ID | 5737123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009973 |
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| Strand | - |
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| Start bp | 240372 |
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| End bp | 241247 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641282330 |
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| Product | integrase family protein |
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| Protein accession | YP_001547921 |
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| Protein GI | 159901675 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCC CATTACGGCA ACGAATGATC GACGATATGC AAATCCGCGG TCTGTCTGCG
CAAACCCAAA GTGCCTATGT CCAAGCGGTT CGTCAGCTTG CACAGTATTT TAACACCCCC
CCTGATCGCC TCAGTGACGA CCAACTCCGC CGCTACTTCC TTTATTTACG AACAGAAAAG
CAGGTCTCGG CGAGCACGAT CACCGTGACA CTCTGCGCCA TTCGTTTTCT TTATCAGCAC
ACCCTCCAGC GATCATGGCC CCTGCTTGAT GCTCTTCGTC CGCCCAAGGC CCAACCACTC
CCGGTGGTTT TGAGCCGTGA TGAAGTCCGC GCCATTCTCC ATCAGGTTCG GACTCCACGT
CATCGGGTCT GCCTCAGTAT CATTTATGCC TGTGGCCTTC GGCTGATGGA AGGCGTGCGC
TTGCAGGTTT GTAACATTGA TAGTGCTCGC TTGATGCTTC ATATTCAGCA TGGCAAAGGC
AATAAAGACC GCTATATCCC CTTACCACCC CCAGCACTCG CTATGCTGCG GGCACATTGG
CGAAGTCATC AGCATCCCCG CTGGCTCTTT CCGTCGCATT GGGTGGATAA GGCGCTTCCC
ATCGCCGCCC GATCCGTTTC CATGAGTCGT GACGGCGTAC AGCGTGCTTT CTTGCTTGCC
TGTCAAGCAA GCGGGATGCG CAAGCATGCA ACCGTCCATA CGCTCCGCCA TTCATGGGCG
ACCCATTTGC TCGAAGCGGG GGTTAATCTC CGCATCATCC AAGGGTGGTT AGGGCATACA
TCCCCAACGA CGACGGCCCA CTACACCCAT CTCACCCAGC ATGCAGAATC GTCCGCTGCT
ATCACCAGTC AGCGCTTGTT TGAGGAACTG CAATGA
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| Protein sequence | MTTPLRQRMI DDMQIRGLSA QTQSAYVQAV RQLAQYFNTP PDRLSDDQLR RYFLYLRTEK
QVSASTITVT LCAIRFLYQH TLQRSWPLLD ALRPPKAQPL PVVLSRDEVR AILHQVRTPR
HRVCLSIIYA CGLRLMEGVR LQVCNIDSAR LMLHIQHGKG NKDRYIPLPP PALAMLRAHW
RSHQHPRWLF PSHWVDKALP IAARSVSMSR DGVQRAFLLA CQASGMRKHA TVHTLRHSWA
THLLEAGVNL RIIQGWLGHT SPTTTAHYTH LTQHAESSAA ITSQRLFEEL Q
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