| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5159 |
|---|
| Symbol | |
|---|
| ID | 5737117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009973 |
|---|
| Strand | + |
|---|
| Start bp | 232543 |
|---|
| End bp | 233382 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641282324 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001547915 |
|---|
| Protein GI | 159901669 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.738281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAG CACTGCCATT GATCACCTAT GCAACCCTGA TCACCCATCT CGCCACCATA
CTCCCCGATA TCGATGCCAC CGCCATGACC GCCATGGTTG CGGCCTTACC GATCGATCCG
CACACGCCCT ACCACGATGG TTCGTCGGAA CCAACGCACA CGGATATTCT AGGCTTTCTT
GATCACCTCG GCATGGCCGC CGAAAAGAGC AATCATGAGC ACGAGGCCCA CTCCTTTTAT
ACGATCTTGT TGCAGATCCA TGACCAATCG CATACACGCG ATGATGCGTT GATCATTTCC
GTCCTGATTC GGTTGGGGAA AATTCTCGAG CGGCAACCAA ACTTTGCGGC AGCCCAACCC
ATTTATGAGC GATTAATCAA GGCCCAAAGT CACATCGATG GCGGCAACCA CCACGCAATC
AAACGGTCGA TCACCGCCTT AGGATTTACC CATCAAATGC TTGGCAATTA TGTCATCGCC
CAAGCGTTAT ATACCCATGC ACTCATGCTC TGTGAACGGC TGGATGGTCC CATGCATTAT
GATACCGCTA TGGCTTTGAT CAATCGTGCC GCAGCGTTGG GACGGCAAGG CTTGTATGCG
GAAGCGATCC CCTGCTTTGA ACGGGCGCTC GCCATCCGCA CCCATCTTTT GGGCGAGCAC
CATATCCAGA CGATTAACAC GATGGGGAAC CTTGCGGTAA CCTATGAGTC CGACGGACGA
CCCGTTATTG CGGCGGCACT CTTGGAGCGG GTGGATGCCT TAAAAAAAGA GGCCCTTGCG
CGCATAAATG CCGGTTCCGA TCCCGCAGCC GAGGTTAACC ACTCGGCCAG CAAATCATGA
|
|---|
| Protein sequence | MKGALPLITY ATLITHLATI LPDIDATAMT AMVAALPIDP HTPYHDGSSE PTHTDILGFL
DHLGMAAEKS NHEHEAHSFY TILLQIHDQS HTRDDALIIS VLIRLGKILE RQPNFAAAQP
IYERLIKAQS HIDGGNHHAI KRSITALGFT HQMLGNYVIA QALYTHALML CERLDGPMHY
DTAMALINRA AALGRQGLYA EAIPCFERAL AIRTHLLGEH HIQTINTMGN LAVTYESDGR
PVIAAALLER VDALKKEALA RINAGSDPAA EVNHSASKS
|
|---|
| |