| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5130 |
|---|
| Symbol | |
|---|
| ID | 5737088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009973 |
|---|
| Strand | + |
|---|
| Start bp | 180862 |
|---|
| End bp | 181923 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641282295 |
|---|
| Product | transposase mutator type |
|---|
| Protein accession | YP_001547886 |
|---|
| Protein GI | 159901640 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCCA TCAAGAAGCA TACCCATTCG CCCGTGATCG GTCAAGCCGA AGCCCAGGCC
ACCTTCCAGC AGCTGGTGCA GCACCAGATT CGGCAGGCAA TTCGCGCCAC GTTCATCGAC
ATTTTGGAAG AGGAAGTGGC CGCCTTCATC GGTGCGCAGC CCTATGAACG CACCGACGAG
CGGCGTGACC ATCGCGCCGG ACATCGCTCG CGTACCCTTG GCACGACCGC TGGCGTGATC
GATGATTTGC CCGTCCCACG GACGCGTGGT GGCTTTCGCA CCCAGCTGTT TGACCGCTAC
CAGCGCCGCA TGCACGATGT GGATACGTTG ATGCAGGATA TGTTTGTCGG CGGGGTCAGC
CAAACCGCCG TTGGCACGGT GGTCGAGCAC TTAACCGGCA ATGCGCCCAG TCCCTCAACC
GTCTCGCGGG TATTTCATAC GCTTGACGAC GAGTTTCAGG CCTGGCAAGC GCGTCCGTTG
CCCCCACGCT CCTGCTATGC CTTCGCCGAT GGCACCTATT TCAGTGTGAT CTATAACGGG
CAAGGCCAGA AAATGCCGAT TTTGGCCTTG ATTGGCATCA CGCCCGACGG GCAACGTGAG
GTGATTGCCT TCACGACGGG CGAGCGAGAA AACCAAGGCG CGTGGGAAAG CCTGCTGGCG
GACATCAAGG ACCGCGGGGT CGAGACCGTT GATCTGTGGA TTACGGATGG GCATCAGGCG
ATGCTGAACG CGATTGCGGC GAAGTTTCCC GCATCGCAGC GCCAACGCTG TGTCGTGCAC
AAAATGAGCA ATATCGAAAG CCACGTTCCC GAAAAATATC GCGATGCGCT CCACGCGGAG
CTGCGGGCGA TCTTCTATCA ACCCGACCGA GCGCAGGCTG ACCAAGCGGC AGCGGCGTTT
ATGGCCAAAT ACGAGCGCCA GTACCCAGAA CGGACGTTCG AGGAGGTCAA GAAACGCAGC
AAAAAAATAG CGACGGCCTT TCGGAATGAG GGCAGTTGTT TACTGCTGTT TTATGCGGTC
GTTCGAACAC TTCAACTTCG CAAAATTCGC ATGCCTGGCT AA
|
|---|
| Protein sequence | MTPIKKHTHS PVIGQAEAQA TFQQLVQHQI RQAIRATFID ILEEEVAAFI GAQPYERTDE
RRDHRAGHRS RTLGTTAGVI DDLPVPRTRG GFRTQLFDRY QRRMHDVDTL MQDMFVGGVS
QTAVGTVVEH LTGNAPSPST VSRVFHTLDD EFQAWQARPL PPRSCYAFAD GTYFSVIYNG
QGQKMPILAL IGITPDGQRE VIAFTTGERE NQGAWESLLA DIKDRGVETV DLWITDGHQA
MLNAIAAKFP ASQRQRCVVH KMSNIESHVP EKYRDALHAE LRAIFYQPDR AQADQAAAAF
MAKYERQYPE RTFEEVKKRS KKIATAFRNE GSCLLLFYAV VRTLQLRKIR MPG
|
|---|
| |