Gene Haur_5128 details

Gene Information

• Locus tag: Haur_5128
• ID: 5737086
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009973
• Strand: +
• Start bp: 179197
• End bp: 179973
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641282293
• Product: transposase IS4 family protein
• Protein accession: YP_001547884
• Protein GI: 159901638

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACATCA TACCGCAGAT CCGCGACGCG ATGCACACCC TCTTAACCAC CACGACCGAG 
GCCATTGCCG CTGCCCAGCA GTACGTCAAA CGCCCTGACC GCGCCAAATT TTGTCCCAGT 
ACCCTCGTTC AAACCCTCGT CTATGACTGG CTGGCCCAGC CGACGGCCAC GGTTGAGCAA 
TTGGCCCAAA TGGCCTGCCG CATCGGCGTT GATGTCTCTC CCCAAGCGAT TGATCAACGC 
TTTACCATGG CCACCGCTGA CCTGCTCCAC CAGCTCGTCC TCGCCAGTAT CAAGCCTGTC 
ATCGCCGCCA ATCCCGTGGC TCTGCCCATT CTCCAACGCT TTACCAGCGT GCGCGTCCAT 
GACAGCACAT CCATTGGGTT GCCCGATGCC CTGACCAGTA CGTGGCGCGG CTGTGGCAAT 
GCGACGACGG GTGGCGGGGC AACCCTGAAA TGTGGGGTGC AGCTCGATGT CCTCACGGGG 
GCGATCACCG CGCTCGATCT GGTCAATGGG CGCGCAGCGG ATCGAGCGCT CCCGCTCCAG 
CAGCGCGATC TGCCACCGGG GAGCTTGCTG CTCGCCGATC GCGGGTTTTA TCATCTGGAG 
CGCTTACGCC ACCATGACCA GCAGGGGGTT TTATGGATCA CCCGCCTGCC CAGCAACGCC 
GTCGTGGCCT ATCCGGGACA CGCCGCGCAG CCGTTGGCGA CGTTTGGCCC AGGAGGGCGT 
GGTTCTGCAT GCGCGTCACA AGGAACGCGG CTTGTAGGGA GGCGGTGGAC AGTGTGA 

 

Protein sequence

MDIIPQIRDA MHTLLTTTTE AIAAAQQYVK RPDRAKFCPS TLVQTLVYDW LAQPTATVEQ 
LAQMACRIGV DVSPQAIDQR FTMATADLLH QLVLASIKPV IAANPVALPI LQRFTSVRVH 
DSTSIGLPDA LTSTWRGCGN ATTGGGATLK CGVQLDVLTG AITALDLVNG RAADRALPLQ 
QRDLPPGSLL LADRGFYHLE RLRHHDQQGV LWITRLPSNA VVAYPGHAAQ PLATFGPGGR 
GSACASQGTR LVGRRWTV