Gene Haur_5092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5092 
Symbol 
ID5737050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009973 
Strand- 
Start bp119494 
End bp120186 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content52% 
IMG OID641282257 
Productthymidylate kinase-like 
Protein accessionYP_001547848 
Protein GI159901602 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCAC CTTCTCGGTC AGTAACCTCT GCTCACCGCC ACCGCTCACC CATGATCTAT 
ATCACGGGCA GTGATGGGAC GGGAAAAACG ACCCAAGTGC ACCGATTAAT GGAGGTGCTT 
ACTGCCCAAG GATTGCCAGT CATCCATCGA TGGTTACGCT TTCCCTTTCG GCTCAGTGGT 
CTGTTGTTAG TATATGCCCG CATTCGCGGA CTGAGTTGGT ATGAAGCCCA TCCCTATGGA 
CGACAGGGCT ATTGGGATTT TCATGCATCG TGGCTGATGC AACACGTTTT TCCGATTGTG 
CTGTGGTTTG ACGCGCTGAG TGTGGCGATT CAAGCCGTGT ATTGGCCAAT CTCGCGCGGG 
AATATCATCG TGTGCGAACG ATTTGTCGTC GATATGCTTG CTGATTTGAT GGTTGCAACC 
CAAGATTTTG GCTTATTAAA GCGCTGGTAT GCCCGCTGGT TTATGCGATT GCTCCCAGCG 
CGGACGCTGG TCATTCTCCT CGATGGCGAT CCTGTTCATA TCAGGCAACG ACGACCGGAT 
TTGGCCTATG ATCGGGTCCT TTCCGATCGT ATCCGTGCCG TTCGAATCAT TGCCGCCCAG 
TGTGGCTGGC CATTAATTGC AGCGGATCAA TCCATTGATG CGATTCATCA GACGATTTGT 
ACTTTTGTTG AGGATTGCTA TGTCAGTGCC TAG
 
Protein sequence
MASPSRSVTS AHRHRSPMIY ITGSDGTGKT TQVHRLMEVL TAQGLPVIHR WLRFPFRLSG 
LLLVYARIRG LSWYEAHPYG RQGYWDFHAS WLMQHVFPIV LWFDALSVAI QAVYWPISRG 
NIIVCERFVV DMLADLMVAT QDFGLLKRWY ARWFMRLLPA RTLVILLDGD PVHIRQRRPD 
LAYDRVLSDR IRAVRIIAAQ CGWPLIAADQ SIDAIHQTIC TFVEDCYVSA