| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5085 |
|---|
| Symbol | |
|---|
| ID | 5737043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009973 |
|---|
| Strand | + |
|---|
| Start bp | 110631 |
|---|
| End bp | 110852 |
|---|
| Gene Length | 222 bp |
|---|
| Protein Length | 73 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641282250 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001547841 |
|---|
| Protein GI | 159901595 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCAA AAAAACGCCT CAGTCCACGG AAAATGGAGA TTCTTGCGCT CGTTGCGGAA
GGGAAAACTG ATCGTCATAT TGCGGTTCTT CTGGGTATTG GTGAATCCAC GGTGAAAACC
TATTTACACG AAATTTATAC CCTCTTGCGA GTCCAAAATC GGGCTGCCGC CGTGTATTGG
TACTGCCAAT ATTTGGGACT GACGGCCCCC ATCAAAGAAT AG
|
|---|
| Protein sequence | MASKKRLSPR KMEILALVAE GKTDRHIAVL LGIGESTVKT YLHEIYTLLR VQNRAAAVYW
YCQYLGLTAP IKE
|
|---|
| |