Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_5071 |
Symbol | |
ID | 5737029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009973 |
Strand | - |
Start bp | 87684 |
End bp | 88526 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 641282236 |
Product | hypothetical protein |
Protein accession | YP_001547827 |
Protein GI | 159901581 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA ATTATATGTT AAATCGATTA GATTCAATAT CTATAGATTC AGATTTACAA AAGAATTTAT ATGATATCTA CATGGCTGAT TCTATACGTT TTAGTAAACG TACAGCGCTT AACGTTATTT ATGAAATTGC ATCATCCCTT GATTCATATG AGTCATCTCA GGAATGTATA GCTATACTTA ATAATGCATG GCATATGATG TATGGAATGA TTATCCGTTT AGATGATATT CAAGATAATC AGCCTATAGC TCCTCCATTT CCTAATGATA TAGACCTATC AACACAATAT AATATTTTAT TTAGCCAATA CCTTATTGCT GAGTCGATAC TCGATGATTT AATAAGTAAT AATCTTTCGA TATATAGATA TGTAAAAATA CGAAGATTAT GGTCTGATAT GATGATAAGA ATGTCCAGTG GTCAGTATTG TGATATTTGT TCGAAAAATC AACCAATAGA GCAAGATATA GCTATTAAAT ATCAACAAAT AGCACAATCT AAAACTGGTG CAACGTATGC TTTAGCTTTT GGTAGTATAG GCATCATATT ATTTGAAGAT AAGTCAATAT ATGAGAGCTT GGCTGTTATA GGTGAGATAT ATGGAACTCT AATTCAATAT GGTGATGATA TCAATGATTA TGAGAGTGAT ATGGATAAAA GTGTATCATT CGTAGATATA GTGAAAAAAT CGGAAAGTAG CCCAATACAT ATGTATAAAT ATATATATTC AATATATTAC GAACATGTTG AATTGAATAT GATAAATTTT CCTGATCAAT TAAAAAATTC GATTAAGGGA TTATTTGTGA AAACTTTTAA TATAGGAGTA TAA
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Protein sequence | MNNNYMLNRL DSISIDSDLQ KNLYDIYMAD SIRFSKRTAL NVIYEIASSL DSYESSQECI AILNNAWHMM YGMIIRLDDI QDNQPIAPPF PNDIDLSTQY NILFSQYLIA ESILDDLISN NLSIYRYVKI RRLWSDMMIR MSSGQYCDIC SKNQPIEQDI AIKYQQIAQS KTGATYALAF GSIGIILFED KSIYESLAVI GEIYGTLIQY GDDINDYESD MDKSVSFVDI VKKSESSPIH MYKYIYSIYY EHVELNMINF PDQLKNSIKG LFVKTFNIGV
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