Gene Haur_5071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5071 
Symbol 
ID5737029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009973 
Strand
Start bp87684 
End bp88526 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content28% 
IMG OID641282236 
Producthypothetical protein 
Protein accessionYP_001547827 
Protein GI159901581 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA ATTATATGTT AAATCGATTA GATTCAATAT CTATAGATTC AGATTTACAA 
AAGAATTTAT ATGATATCTA CATGGCTGAT TCTATACGTT TTAGTAAACG TACAGCGCTT
AACGTTATTT ATGAAATTGC ATCATCCCTT GATTCATATG AGTCATCTCA GGAATGTATA
GCTATACTTA ATAATGCATG GCATATGATG TATGGAATGA TTATCCGTTT AGATGATATT
CAAGATAATC AGCCTATAGC TCCTCCATTT CCTAATGATA TAGACCTATC AACACAATAT
AATATTTTAT TTAGCCAATA CCTTATTGCT GAGTCGATAC TCGATGATTT AATAAGTAAT
AATCTTTCGA TATATAGATA TGTAAAAATA CGAAGATTAT GGTCTGATAT GATGATAAGA
ATGTCCAGTG GTCAGTATTG TGATATTTGT TCGAAAAATC AACCAATAGA GCAAGATATA
GCTATTAAAT ATCAACAAAT AGCACAATCT AAAACTGGTG CAACGTATGC TTTAGCTTTT
GGTAGTATAG GCATCATATT ATTTGAAGAT AAGTCAATAT ATGAGAGCTT GGCTGTTATA
GGTGAGATAT ATGGAACTCT AATTCAATAT GGTGATGATA TCAATGATTA TGAGAGTGAT
ATGGATAAAA GTGTATCATT CGTAGATATA GTGAAAAAAT CGGAAAGTAG CCCAATACAT
ATGTATAAAT ATATATATTC AATATATTAC GAACATGTTG AATTGAATAT GATAAATTTT
CCTGATCAAT TAAAAAATTC GATTAAGGGA TTATTTGTGA AAACTTTTAA TATAGGAGTA
TAA
 
Protein sequence
MNNNYMLNRL DSISIDSDLQ KNLYDIYMAD SIRFSKRTAL NVIYEIASSL DSYESSQECI 
AILNNAWHMM YGMIIRLDDI QDNQPIAPPF PNDIDLSTQY NILFSQYLIA ESILDDLISN
NLSIYRYVKI RRLWSDMMIR MSSGQYCDIC SKNQPIEQDI AIKYQQIAQS KTGATYALAF
GSIGIILFED KSIYESLAVI GEIYGTLIQY GDDINDYESD MDKSVSFVDI VKKSESSPIH
MYKYIYSIYY EHVELNMINF PDQLKNSIKG LFVKTFNIGV