Gene Haur_5057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5057 
Symbol 
ID5737015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009973 
Strand
Start bp71575 
End bp72459 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content60% 
IMG OID641282222 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001547813 
Protein GI159901567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.601105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCTC CCCAACGAAC CCGCGAACCA TCACCCGCGT GGCAACAGCT CGAAATGAAG 
TTGACCTGCC CAAAGCAGCA TGTCTACGAG TTGATCCGAC CCGTTGTCCT GTTTGACCAA
CCGGTTGCTG AGCGGGCTGC CGAAACGGCC ACGGCAGAAC GCACCCTCTA TCGCCATGTA
CAGACTTTTC GTCAGCATGG GCTTGGGGCG ACCCAACGCC CAGCAACGGC TCCGATCCGC
GCTGCTGCTC GGCTTCCTGC CGAAGCCATT GCCTATCTGC TGGCCATCAA GGCCGAGTAT
CCGCCGATGC GCCATTACGA ACTTGCGACC ATTTGCCTCG TGCGCTTTGG CCGCCGACCC
AGCATCAAAA CCGTGAAGCG GGCCTTGGCA ACCAATAGCT TGCCCATGCT GACCACCCGT
CGCTTTCCGC CCTATCACAC CATTCCCGAT ATTGTCGAGC GCCGCCGTGC CATTTTGCGG
CTTATCACCG AGGGCTGGAC GAAGAAAAGC ATTGCTGGCT ATCTGGGCAT CAGCCGGAAA
ACCGTCCATG GCGTGCTCAA ACGCTGGGAT ACGGAAGGGC TTGCAGGCCT CAAACGCCGA
TCATCAGCGC CGCATCGGCA TGGCCGACGA CTGGCAAGTA TGGTTCAGCA CCACGTCCGT
CGCCTCCAGC GCAACCCCTT GCTTGGTGCA TGGCGACTCC ATGCTGCCCT CCGTCGCGAA
GGCATTCATG TGAGTCCTCG CACCTGTGGC CGCTTGATGG CAATCAATCG GGAGGTGTTT
CCTGAATTAC GACCGCCCGA GCCGCCCCCG AAAAAAGATC CGCAACCCAT GCCGTTTGCA
GCCCAGTATC GTCATCAGTC ACCCAGAGGG TACCCGGACG ATTGA
 
Protein sequence
MAAPQRTREP SPAWQQLEMK LTCPKQHVYE LIRPVVLFDQ PVAERAAETA TAERTLYRHV 
QTFRQHGLGA TQRPATAPIR AAARLPAEAI AYLLAIKAEY PPMRHYELAT ICLVRFGRRP
SIKTVKRALA TNSLPMLTTR RFPPYHTIPD IVERRRAILR LITEGWTKKS IAGYLGISRK
TVHGVLKRWD TEGLAGLKRR SSAPHRHGRR LASMVQHHVR RLQRNPLLGA WRLHAALRRE
GIHVSPRTCG RLMAINREVF PELRPPEPPP KKDPQPMPFA AQYRHQSPRG YPDD