Gene Haur_5033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5033 
Symbol 
ID5736992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009973 
Strand
Start bp46270 
End bp47982 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content59% 
IMG OID641282200 
Producttransposase IS204/IS1001/IS1096/IS1165 family protein 
Protein accessionYP_001547791 
Protein GI159901545 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.681228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGTTC TATGGATCTT GCAACGTTGC TGCTTCCTGA TGCGACTGTC ATGCAGGTCG 
ATGACTGGAC GGTGGATACG ACCCATCAGC AGATCACCCT TCGCGCACAC CACGCCACGC
ACGCTGCCAT GCCCGATCTG TTCCACGCCC GCTGTTCGCG TCCATAGTCG GTATGTCCGT
ACCCTCACCG ACCTCCCGTG GGCGACGTAC ACCATTAAAT TGTCGCTCCG GGTTCGGAAA
TTTTTCTGTG ACCTGCCGAC CTGCAATCGA CGAATTTTTA CCGAACGCAT CCCAACGATC
CTCCAGCCCT CGGCACGCGT TACACTGCGC TGTACCCACG CGCAACGACA CGTAGGTCTT
GCTACTGGCG GTGTCGGTGG TGCACAGCTC ACGACGCTCC TCCGCTTTGC CGCAGGCCGT
GATCGTCTGT TACGTATCGT GCGTCAGATG CCCCTCCCCG CGATCGGGAA GCCCATCCAT
ATTGGGGTCG ATGACTGGGC ATGGCGAAAA GGCCAGCGGT ATGGAACCAT CATTGTGGAT
CTGGATACGC ATCGTCCATT GGCCGTGTTG CCTGATCGCC AAGCGAGTAC GTTGACCACC
TGGCTCCATG CCCATCCCAG TGTTGCCATC ATTAGCCGTG ATCGCAGCAG TGCCTTTGCT
GAGGGAGCTG CGGCAGGGGC ACCTCACGCA ATACAGGTTG CGGATCGTTT TCACTTAATG
GTCAATGTGC GAGAAGCACT GCTTCAAACG TTGGTGGCCC ATCGCACGCT GGTCGAGGCC
GTGCTGAGTC AGCCAACGCC CCTGACCGCC GCACCCCATC CGGACGCACA ACGAACCCTC
ATGGTTGATG ACCCATTACC GCCCCAACCC ATTCCGGCGC AGGTTCGGCA TCGGAGCGAT
GCCATCCACG CTCGTCGCCA ACGGCAGTTC GAACAGATTC AGGAATTGGT CGCACGTGGC
TGGACGCATC GAGCCATTGC CCACGAGCTT GGACTCACAC GGCAAACCGT GGCACGCTAT
CACGCCATTC ACGATGGGCC ACCACCGCAG CATCACGCGC ATCGTCGCAG TGTGCTTGAT
CGCTTCAAGC CGTACCTGAT TGAACGATGG AATACGGGAT GCCTGAATGC CGCACAGCTC
TGTTTAGAGA TTCAAGCGCA AGGGTATCAG GGAACTGCAC ACACGGTGCG ACGCTATGTC
ACCCAACTTC GGAAAGCCAG TGGCCTACCC GCATGGAGTC GTGATGGTGC GGCGCGGCGC
GGACATGTGG GACAGGCATG GCCGTGTGGC AGTCTCACCC AGTTGGTGTG GGAATTGGTG
CGCCAGCCCA CGAAACAGGC AGCATGGCTG AGGCCGCTCA CCGAAGACCT CCGCACGCGC
CATCCCCAGC TCGATAGCGC GATAACGCTG ATGGAATCGT TTTACGCTAT GATTCGGAAT
CGGGAACCAA CAGGATTTGC GCCATGGCTC GCGCAAGCAC ACCAGAGCGG ATGTGCTGCG
TTTGTGCGGC TAGCCCGCAG CTTTGAGGCT GATGCGGCGG CGATTGAGGC CGCGCTGACC
ATGCGATGGA GTCAAGGACC AGTAGAAGGA ACCATTCATC GATTGAAACT CGTCAAGCGC
CAAATGTATG GACGGGCAAA CCTTGATTTG CTGGTCCGGC GTGTTCTGTT GACGGGGCGG
TCTCCACAAA AATTGCTGCC GTATTCGGTA TGA
 
Protein sequence
MEVLWILQRC CFLMRLSCRS MTGRWIRPIS RSPFAHTTPR TLPCPICSTP AVRVHSRYVR 
TLTDLPWATY TIKLSLRVRK FFCDLPTCNR RIFTERIPTI LQPSARVTLR CTHAQRHVGL
ATGGVGGAQL TTLLRFAAGR DRLLRIVRQM PLPAIGKPIH IGVDDWAWRK GQRYGTIIVD
LDTHRPLAVL PDRQASTLTT WLHAHPSVAI ISRDRSSAFA EGAAAGAPHA IQVADRFHLM
VNVREALLQT LVAHRTLVEA VLSQPTPLTA APHPDAQRTL MVDDPLPPQP IPAQVRHRSD
AIHARRQRQF EQIQELVARG WTHRAIAHEL GLTRQTVARY HAIHDGPPPQ HHAHRRSVLD
RFKPYLIERW NTGCLNAAQL CLEIQAQGYQ GTAHTVRRYV TQLRKASGLP AWSRDGAARR
GHVGQAWPCG SLTQLVWELV RQPTKQAAWL RPLTEDLRTR HPQLDSAITL MESFYAMIRN
REPTGFAPWL AQAHQSGCAA FVRLARSFEA DAAAIEAALT MRWSQGPVEG TIHRLKLVKR
QMYGRANLDL LVRRVLLTGR SPQKLLPYSV