Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_5028 |
Symbol | |
ID | 5736987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009973 |
Strand | + |
Start bp | 37254 |
End bp | 37886 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641282195 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001547786 |
Protein GI | 159901540 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAAAA CAGCTAATTA TAAAGCGGGC GATGTCGTCG TGAACCCCAT CACCGGTGAG CGTGGAGTTG TCCGCCTAGG AGCGAGCGAG TCTCATGACG GGAGCGGCGT GTATGATCTC TACGTTCAAC CAGGCGGTGC TGTAGCTGGC GAGCATATCC ATCCCAATAT GCTAGAAAGC TTTACCGTGC TGCGGGGCAG GGTTGGGTTT CGGATCGATG GCAAAGAATC GATCGTGGAG TTGGGTGCAA AAATGACTGT GCCGATCGGT GTGGCCCACG ATTGGTGGAA CGTCGGCGAC GAAGAAGCCC ACGTGCTAGT CGAGGTCTAT CCAGCAGCCA GGTTTGAGGA GGCTATCACC GATCTATTCG GATTGGCACG GAACGGCAAG ACCAACACCA ATGGGATGCC GAAGCTGCTC CAGGGGGCGC TCTTCGCCCG TGAGTACAAG GATGTGCTCT ACTTCACGAA ACCGCCGCTC TGGGTGCAAA ACATTCTCTT CGCAGTGTTA GCACCTATCG CCAAACTGCT GGGCTATCAG GGCAGTTACC CAGAATACCG CACCCAGCCG CGTGGATGGG TCGAGGTGGA GCCTTGGCCA CTCACGGATA AAGAGAACGG GCGAGCACGT TAA
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Protein sequence | MPKTANYKAG DVVVNPITGE RGVVRLGASE SHDGSGVYDL YVQPGGAVAG EHIHPNMLES FTVLRGRVGF RIDGKESIVE LGAKMTVPIG VAHDWWNVGD EEAHVLVEVY PAARFEEAIT DLFGLARNGK TNTNGMPKLL QGALFAREYK DVLYFTKPPL WVQNILFAVL APIAKLLGYQ GSYPEYRTQP RGWVEVEPWP LTDKENGRAR
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