Gene Haur_5028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5028 
Symbol 
ID5736987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009973 
Strand
Start bp37254 
End bp37886 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content56% 
IMG OID641282195 
Productcupin 2 domain-containing protein 
Protein accessionYP_001547786 
Protein GI159901540 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAAA CAGCTAATTA TAAAGCGGGC GATGTCGTCG TGAACCCCAT CACCGGTGAG 
CGTGGAGTTG TCCGCCTAGG AGCGAGCGAG TCTCATGACG GGAGCGGCGT GTATGATCTC
TACGTTCAAC CAGGCGGTGC TGTAGCTGGC GAGCATATCC ATCCCAATAT GCTAGAAAGC
TTTACCGTGC TGCGGGGCAG GGTTGGGTTT CGGATCGATG GCAAAGAATC GATCGTGGAG
TTGGGTGCAA AAATGACTGT GCCGATCGGT GTGGCCCACG ATTGGTGGAA CGTCGGCGAC
GAAGAAGCCC ACGTGCTAGT CGAGGTCTAT CCAGCAGCCA GGTTTGAGGA GGCTATCACC
GATCTATTCG GATTGGCACG GAACGGCAAG ACCAACACCA ATGGGATGCC GAAGCTGCTC
CAGGGGGCGC TCTTCGCCCG TGAGTACAAG GATGTGCTCT ACTTCACGAA ACCGCCGCTC
TGGGTGCAAA ACATTCTCTT CGCAGTGTTA GCACCTATCG CCAAACTGCT GGGCTATCAG
GGCAGTTACC CAGAATACCG CACCCAGCCG CGTGGATGGG TCGAGGTGGA GCCTTGGCCA
CTCACGGATA AAGAGAACGG GCGAGCACGT TAA
 
Protein sequence
MPKTANYKAG DVVVNPITGE RGVVRLGASE SHDGSGVYDL YVQPGGAVAG EHIHPNMLES 
FTVLRGRVGF RIDGKESIVE LGAKMTVPIG VAHDWWNVGD EEAHVLVEVY PAARFEEAIT
DLFGLARNGK TNTNGMPKLL QGALFAREYK DVLYFTKPPL WVQNILFAVL APIAKLLGYQ
GSYPEYRTQP RGWVEVEPWP LTDKENGRAR